New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1465754 | 67 (1.330) | 4 (0.080) | 4/244 | NT | 6.6% | coding (1437/1560 nt) | algG | poly(beta‑D‑mannuronate) C5 epimerase |
? | NC_002947 | = 1465798 | 49 (1.030) | coding (1393/1560 nt) | algG | poly(beta‑D‑mannuronate) C5 epimerase |
TCAGGTGTGGAGTCATGGTCTGGGCTTCCTTAATCGATCATTTCGGTCTGGCGTTCGACCGGGTCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1465602‑1465754 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgctgTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGCATCAGCCTCAATGGTGTGCTGGGCGAGCGCCAGGACGAAATCCTCGACCTGCTGGTACGCCAGCAGAAGGCTGTGCTGATCGACCCGGTCG < NC_002947/1465798‑1465657 TCAGGTGTGGAGTCATGGTCTGGGCTTCCTTAATCGATCATTTCGGTCTGGCGTTCGACCGGGTCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCC > 7:278974/1‑149 GGTGTGGAGTCATGGTCTGGGCTTCCTTAATCGATCATTTCGGTCTGGCGTTCGACCGGGTCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCCGCT < 5:69955/149‑1 GTGTGGAGTCATGGTCTGGGCTTCCTTAATCGATCATTTCGGTCTGGCGTTCGACCGGGTCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCCGCTG > 1:41270/1‑149 CTTAATCGATCATTTCGGTCTGGCGTTCGACCGGGTCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCCGCTGTCGGTCGAGCTGTACAAGGTGTC > 3:265909/1‑148 GACCGGGGCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCCGCGG > 1:153801/1‑147 GACCGGGGCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGG < 2:153801/147‑1 ACCGGGTCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGCAT < 4:265909/149‑1 GCCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGCATCAGCCTCAATGGTGTGCTGGGCGAGCGCCAGGACGAAATCCTCGACCTGCTGGTACGCCAGCAGAAGGCTGTGCTGATCGACCCGGTC > 3:112822/1‑148 CCGCTGTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGCATCAGCCTCAATGGTGTGCTGGGCGAGCGCCAGGACGAAATCCTCGACCTGCTGGTACGCCAGCAGAAGGCTGTGCTGATCGACCCGGTCG > 8:278974/1‑148 TCAGGTGTGGAGTCATGGTCTGGGCTTCCTTAATCGATCATTTCGGTCTGGCGTTCGACCGGGTCGATCAGCACAGCCTTCTGCTGGCGTACCAGCAGGTCGAGGATTTCGTCCTGGCGCTCGCCCAGCACACCATTGAGGCTGATGCCGCTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1465602‑1465754 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgctgTCGGTCGAGCTGTACAAGGTGTCCATGCTCGCCCCGCGCAAGGCCAGCGGCATCAGCCTCAATGGTGTGCTGGGCGAGCGCCAGGACGAAATCCTCGACCTGCTGGTACGCCAGCAGAAGGCTGTGCTGATCGACCCGGTCG < NC_002947/1465798‑1465657 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |