| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1558468 = | 53 (1.050) | 5 (0.110) | 5/242 | NT | 10.0% | coding (433/732 nt) | PP_1369 | hypothetical protein |
| ? | NC_002947 | 1558538 = | 40 (0.850) | coding (363/732 nt) | PP_1369 | hypothetical protein | |||||
GCGAGTTCTACAGCCTTGATGAGAACGAAGCGCTTACCCGGCTACAGGAGGGCCTGGCACTGTTCGAGGACCAAGGGTGGCCTGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1558620‑1558468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgccacAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTGCGCGGTACGGGGCCTTCGTC > NC_002947/1558538‑1558684 GCGAGTTCTACAGCCTTGATGAGAACGAAGCGCTTACCCGGCTACAGGAGGGCCTGGCACTGTTCGAGGACCAAGGGTGGCCTGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTG > 5:98755/1‑149 GAGTTCTACAGCCTTGATGAGAACGAAGCGCTTACCCGGCTACAGGAGGGCCTGGCACTGTTCGAGGACCAAGGGTGGCCTGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGC > 7:91099/1‑148 CTGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAG > 8:59172/1‑148 TGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAA > 5:275398/1‑149 GTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTC > 7:299300/1‑133 GTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTC < 8:299300/133‑1 TCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGG < 6:275398/148‑1 ACAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTGCGCGGTACGGGGCCTTCGTC < 1:248832/149‑1 GCGAGTTCTACAGCCTTGATGAGAACGAAGCGCTTACCCGGCTACAGGAGGGCCTGGCACTGTTCGAGGACCAAGGGTGGCCTGTGGCAGGGTTTGTCGCACCGGCCTGGCTCATGAGCCAGGGCACGCGGCAAGCGCTGTGCCGCCTGCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1558620‑1558468‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgccacAGGCCACCCTTGGTCCTCGAACAGTGCCAGGCCCTCCTGTAGCCGGGTAAGCGCTTCGTTCTCATCAAGGCTGTAGAACTCGCCTTCATGGGTATAAATGCGCCGCATGAAGTAGTCGACGGGGCTGCGCGGTACGGGGCCTTCGTC > NC_002947/1558538‑1558684 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |