New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 1585631 | 58 (1.150) | 4 (0.080) | 4/244 | NT | 6.9% | coding (243/876 nt) | PP_1389 | oxaloacetate decarboxylase |
? | NC_002947 | = 1585659 | 53 (1.110) | coding (271/876 nt) | PP_1389 | oxaloacetate decarboxylase |
TTCGACCCAATGTCGGCACGCATTGCCGCAGACCTGGGCTTCGAAGTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCTCCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1585479‑1585631 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcggCGTCGGCCAGTACCGGCAGTTGCGCGACCCGACCAATGCGGGTGGCCTGCTCGACGAACTCGCTGAGGGTGATCAGAGCGAAGTCCGGAGCAGCCAGTACCTGCAACGAAGCGACCGAACCGCCGAGGATACCGACTTCGAAGCC < NC_002947/1585659‑1585515 TTCGACCCAATGTCGGCACGCATTGCCGCAGACCTGGGCTTCGAAGTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCTCCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGG > 5:241505/1‑149 GACCCAATGTCGGCACGCATTGCCGCAGACCTGGGCTTCGAAGTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCTCCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGGTCG < 7:227766/149‑1 GACCCAATGTCGGCACGCATTGCCGCAGACCTGGGCTTCGAAGTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCTCCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGGTC < 2:188467/148‑1 GCACGCATTGCCGCAGACCTGGGCTTCGAAGTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCACCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGGTCGGCGTCGGCCAG > 1:103246/1‑148 GGGCTTCGAAGTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCTCCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGGTCGGCGTCGGCCAGTACCGGCAGTTGCGCGACCC > 2:203881/1‑148 AAGTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCTCCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGGTCGGCGTCGGCCAGTACCGGCAGTTGCGCGACCCGACCAATGC < 1:203881/149‑1 GTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCTCCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGGTCGGCGTCGGCCAGTACCGGCAGTTGCGCGACCCGACCAATGCGG < 2:103246/149‑1 CGGCGTCGGCCAGTACCGGCAGTTGCGCGACCCGACCAATGCGGGTGGCCTGCTCGACGAACTCGCTGAGGGTGATCAGAGCGAAGTCCGGA < 5:220732/92‑1 CGGCGTCGGCCAGTACCGGCAGTTGCGCGACCCGACCAATGCGGGTGGCCTGCTCGACGAACTCGCTGAGGGTGATCAGAGCGAAGTCCGGA > 6:220732/1‑92 GGCGTCGGCCAGTACCGGCAGTTGCGCGACCCGACCAATGCGGGTGGCCTGCTCGACGAACTCGCTGAGGGTGATCAGAGCGAAGTCCGGAGCAGCCAGTACCTGCAACGAAGCGACCGAACCGCCGAGGATACCGACTTCGAAGCC > 2:75451/1‑147 TTCGACCCAATGTCGGCACGCATTGCCGCAGACCTGGGCTTCGAAGTCGGTATCCTCGGCGGTTCGGTCGCTTCGTTGCAGGTACTGGCTGCTCCGGACTTCGCTCTGATCACCCTCAGCGAGTTCGTCGAGCAGGCCACCCGCATTGGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1585479‑1585631 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtcggCGTCGGCCAGTACCGGCAGTTGCGCGACCCGACCAATGCGGGTGGCCTGCTCGACGAACTCGCTGAGGGTGATCAGAGCGAAGTCCGGAGCAGCCAGTACCTGCAACGAAGCGACCGAACCGCCGAGGATACCGACTTCGAAGCC < NC_002947/1585659‑1585515 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |