New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 1650786 = | 47 (0.930) | 3 (0.060) | 3/248 | NT | 5.8% | coding (274/2043 nt) | PP_1446 | TonB‑dependent receptor |
? | NC_002947 | 1650821 = | 52 (1.070) | coding (239/2043 nt) | PP_1446 | TonB‑dependent receptor |
AACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAACAAGCAGCCCGGTGTCGCCTCTACCTGGTTCGGCCCTGGCGCCAGCCGCCCGGTGATCCGCGGCCTGGATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1650938‑1650786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGA > NC_002947/1650821‑1650968 AACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAACAAGCAGCCCGGTGTCGCCTCTACCTGGTTCGGCCCTGGCGCCAGCCGCCCGGTGATCCGCGGCCTGGAT < 3:264550/149‑1 ACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAACAAGCAGCCCGGTGTCGCCTCTACCTGGTTCGGCCCTGGCGCCAGCCGCCCGGTGATCCGCGGCCTGGATG < 2:774/149‑1 CTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAACAAGCAGCCCGGTGTCGCCTCTACCTGGTTCGGCCCTGGCGCCAGCCGCCCGGTGATCCGCGGCCTGGATGG < 5:184903/149‑1 TGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAACAAGCAGCCCGGTGTCGCCTCTACCTGGTTCGGCCCTGGCGCCAGCCGCCCGGTGATCCGCGGCCTGGATGGC > 6:220287/1‑149 CCCTGGCGCCAGCCGCCCGGTGATCCGCGGCCTGGATGGCGCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTG < 1:112075/106‑1 CCCTGGCGCCAGCCGCCCGGTGATCCGCGGCCTGGATGGCGCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTG > 2:112075/1‑106 GCGCCAGCCGCCCGGTGATCCGCGGCCTGGATGGCGCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGC > 3:112561/1‑149 GCGCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGAT > 2:51260/1‑149 GCGCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGA < 7:74444/148‑1 CGCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATG < 1:203494/149‑1 GCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGA > 8:94597/1‑149 AACTGGCCGCCCCCAGCACCGTGCTCGAAGGCGACAACCTGCTGCAACAGCAGCACGGCAGCCTGGGTGAAACCCTTAACAAGCAGCCCGGTGTCGCCTCTACCTGGTTCGGCCCTGGCGCCAGCCGCCCGGTGATCCGCGGCCTGGATGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1650938‑1650786 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggcgCCAGGGCCGAACCAGGTAGAGGCGACACCGGGCTGCTTGTTAAGGGTTTCACCCAGGCTGCCGTGCTGCTGTTGCAGCAGGTTGTCGCCTTCGAGCACGGTGCTGGGGGCGGCCAGTTGGCGGTTACCCAGCGGGTTGGCGGTGATGA > NC_002947/1650821‑1650968 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |