| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1736845 | 42 (0.830) | 4 (0.080) | 4/248 | NT | 9.0% | coding (795/1035 nt) | dapD | 2,3,4,5‑tetrahydropyridine‑2,6‑dicarboxylate N‑succinyltransferase |
| ? | NC_002947 | = 1736867 | 41 (0.850) | coding (773/1035 nt) | dapD | 2,3,4,5‑tetrahydropyridine‑2,6‑dicarboxylate N‑succinyltransferase | |||||
TCGGTCTGGCCGGCCAGGTCGCGGGCCTTGACCACTTTGACCAGTTCGTTGTTCTCGTCCAGCAGGTTCACCTTGGTGCCCGCGGTGATGTACAGGCCGGCTTCGACGGTGTTGCGGTCGCCCAACGGAATACCGATACCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1736702‑1736845‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgAGGGCTGCCTGATCGGCGCCAACGCCGGTATCGGTATTCCGTTGGGCGACCGCAACACCGTCGAAGCCGGCCTGTACATCACCGCGGGCACCAAGGTGAACCTGCTGGACGAGAACAACGAACTGGTCAAAGTGGTCAAGGCCCGCG < NC_002947/1736867‑1736721 TCGGTCTGGCCGGCCAGGTCGCGGGCCTTGACCACTTTGACCAGTTCGTTGTTCTCGTCCAGCAGGTTCACCTTGGTGCCCGCGGTGATGTACAGGCCGGCTTCGACGGTGTTGCGGTCGCCCAACGGAATACCGATACCGGCGAGGGC > 3:67313/1‑149 GCCTTGACCACTTTGACCAGTTCGTTGTTCTCGTCCAGCAGGTTCACCTTGGTGCCCGCGGTGATGTACAGGCCGGCTTCGACGGTGTTGCGGTCGCCCAACGGAATACCGATACCGGCGAGGGCTGCCTGATCGGCGCCAACGCCGGT < 4:67313/149‑1 CTTGACCACTTTGACCAGTTCGTTGTTCTCGTCCAGCAGGTTCACCTTGGTGCCCGCGGTGATGTACAGGCCGGCTTCGACGGTGTTGCGGTCGCCCAACGGAATACCGATACCGGCGAGGGCTGCCTGATCGGCGCCAACGCCGGTAT < 5:257680/149‑1 CACTTTGACCAGTTCGTTGTTCTCGTCCAGCAGGTTCACCTTGGTGCCCGCGGTGATGTACAGGCCGGCTTCGACGGTGTTGCGGTCGCCCAACGGAATACCGATACCGGCGAGGGCTGCCTGATCGGCGCCAACGCCGGTATCGG > 5:72214/1‑146 CACTTTGACCAGTTCGTTGTTCTCGTCCAGCAGGTTCACCTTGGTGCCCGCGGTGATGTACAGGCCGGCTTCGACGGTGTTGCGGTCGCCCAACGGAATACCGATACCGGCGAGGGCTGCCTGATCGGCGCCAACGCCGGTATCGG < 6:72214/146‑1 GGCGAGGGCTGCCTGATCGGCGCCAACGCCGGTATCGGTATTCCGTTGGGCGACCGCAACACCGTCGAAGCCGGCCTGTACATCACCGCGGGCACCAAGGTGAACCTGCTGGACGAGAACAACGAACTGGTCAAAGTGGTCAAGGCCC < 8:240695/148‑1 CGAGGGCTGCCTGATCGGCGCCAACGCCGGTATCGGTATTCCGTTGGGCGACCGCAACACCGTCGAAGCCGGCCTGTACATCACCGCGGGCACCAAGGTGAACCTGCTGGACGAGAACAACGAACTGGTCAAAGTGGTCAAGGCCCGCG < 1:280213/149‑1 CGAGGGCTGCCTGATCGGCGCCAACGCCGGTATCGGTATTCCGTTGGGCGACCGCAACACCGTCGAAGCCGGCCTGTACATCACCGCGGGCACCAAGGTGAACCTGCTGGACGAGAACAACGAACTGGTCAAAGTGGTCAAGGCCCGC > 2:280213/1‑148 TCGGTCTGGCCGGCCAGGTCGCGGGCCTTGACCACTTTGACCAGTTCGTTGTTCTCGTCCAGCAGGTTCACCTTGGTGCCCGCGGTGATGTACAGGCCGGCTTCGACGGTGTTGCGGTCGCCCAACGGAATACCGATACCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1736702‑1736845‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgAGGGCTGCCTGATCGGCGCCAACGCCGGTATCGGTATTCCGTTGGGCGACCGCAACACCGTCGAAGCCGGCCTGTACATCACCGCGGGCACCAAGGTGAACCTGCTGGACGAGAACAACGAACTGGTCAAAGTGGTCAAGGCCCGCG < NC_002947/1736867‑1736721 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |