| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 1818173 = | 41 (0.810) | 4 (0.080) | 4/246 | NT | 8.0% | coding (315/789 nt) | PP_1622 | M23B subfamily metallopeptidase |
| ? | NC_002947 | 1818241 = | 53 (1.100) | coding (383/789 nt) | PP_1622 | M23B subfamily metallopeptidase | |||||
CGAATTTTCCAATCAGTACACCGTTGGCAGGCCAGGTCCACCCACCTACCGCGCGCTCTGCGGCTGGTACGGTAGCAACCACAGGGGCAGGGGCGGAAGGCGCCGACGTGGCCGGTTTGCTGGTGCTGGCAGGCGCCGTGGCTGTGCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1818324‑1818173‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccCTGTGGTTGCTACCGTACCAGCCGCAGAGCGCGCGGTAGGTGGGTGGACCTGGCCTGCCAACGGTGTACTGATTGGAAAATTCGCTTCAAACGGTAGTTTGAATAAAGGCATTGATATCGCCGGTGATTTGGG > NC_002947/1818241‑1818373 CGAATTTTCCAATCAGTACACCGTTGGCAGGCCAGGTCCACCCACCTACCGCGCGCTCTGCGGCTGGTACGGTAGCAACCACAGGGGCAGGGGCGGAAGGCGCCGACGTGGCCGGTTTGCTGGTGCTGGCAGGCGCCGTGGCTGTGCTG > 5:180080/1‑149 AATTTTCCAATCAGTACACCGTTGGCAGGCCAGGTCCACCCACCTACCGCGCGCTCTGCGGCTGGTACGGTAGCAACCACAGGGGCAGGGGCGGAAGGCGCCGACGTGGCCGGTTTGCTGGTGCTGGCAGGCGCCGTGGCTGTGCTGCC > 3:150105/1‑149 CACAGGGGCAGGGGCGGAAGGCGCCGACGTGGCCGGTTTGCTGGTGCTGGCAGGCGCCGTGGCTGTGCTGCCCCTGTGGTTGCTACCGTACCAGCCGCAGAGCGCGCGGTAGGTGGGTGGACCTGGCCTGCCAACGGTGTAC < 7:151144/142‑1 CACAGGGGCAGGGGCGGAAGGCGCCGACGTGGCCGGTTTGCTGGTGCTGGCAGGCGCCGTGGCTGTGCTGCCCCTGTGGTTGCTACCGTACCAGCCGCAGAGCGCGCGGTAGGTGGGTGGACCTGGCCTGCCAACGGTGTAC > 8:151144/1‑142 GGGCAGGGGCGGAAGGCGCCGACGTGGCCGGTTTGCTGGTGCTGGCAGGCGCCGTGGCTGTGCTGCCCCTGTGGTTGCTACCGTACCAGCCGCAGAGCGCGCGGTAGGTGGGTGGACCTGGCCTGCCAACGGTGTACTGATTGGAAAAT > 6:84585/1‑149 CGTGGCTGTGCTGCCCCTGTGGTTGCTACCGTACCAGCCGCAGAGCGCGCGGTAGGTGGGTGGACCTGGCCTGCCAACGGTGTACTGATTGGAAAATTCGCTTCAAACGGTAGTTTGAATAAAGGCATTGATATCGCCGGTGATTTGGG < 5:84585/149‑1 CGAATTTTCCAATCAGTACACCGTTGGCAGGCCAGGTCCACCCACCTACCGCGCGCTCTGCGGCTGGTACGGTAGCAACCACAGGGGCAGGGGCGGAAGGCGCCGACGTGGCCGGTTTGCTGGTGCTGGCAGGCGCCGTGGCTGTGCTGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/1818324‑1818173‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctgcccCTGTGGTTGCTACCGTACCAGCCGCAGAGCGCGCGGTAGGTGGGTGGACCTGGCCTGCCAACGGTGTACTGATTGGAAAATTCGCTTCAAACGGTAGTTTGAATAAAGGCATTGATATCGCCGGTGATTTGGG > NC_002947/1818241‑1818373 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |