New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 2015671 | 44 (0.870) | 3 (0.060) | 3/248 | NT | 5.6% | coding (722/888 nt) | PP_1795 | hypothetical protein |
? | NC_002947 | = 2015702 | 58 (1.200) | coding (691/888 nt) | PP_1795 | hypothetical protein |
CTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2015522‑2015671 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcCTGGTGGTGTTCGGCAATGCCGAGCCACAGCGCCTGGTCGCCAATCAGATGATGCATGGCCCCACCGGCAACGAGCCGTTGGTGGCGCTGCATATCGCCTTGACCCCCGTTACGAAGATGAACGCTGCCCGCCTTAAGTCTCCGTGG < NC_002947/2015702‑2015556 CTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGG > 1:147544/1‑149 CTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCATCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGG < 6:160100/149‑1 TGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGC > 8:168445/1‑149 GAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCCTGGTGGTGTTCGGCAATGCCGAGCCACAGCGCCTGGT < 7:144612/149‑1 AGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCCTGGTGGTGTTCGGCAATGCCGAGCCACAGCGCCTGGTC < 3:154024/142‑1 AGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCCTGGTGGTGTTCGGCAATGCCGAGCCACAGCGCCTGGTC > 4:154024/1‑142 GCCTGGTGGTGTTCGGCAATGCCGAGCCACAGCGCCTGGTCGCCAATCAGATGATGCATGGCCCCACCGGCAACGAGCCGTTGGTGGCGCTGCATATCGCCTTGACCCCCGTTACGAAGATGAACGCTGCCCGCCTTAAGTCTCCGTGG > 4:151894/1‑149 CTGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/2015522‑2015671 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggcCTGGTGGTGTTCGGCAATGCCGAGCCACAGCGCCTGGTCGCCAATCAGATGATGCATGGCCCCACCGGCAACGAGCCGTTGGTGGCGCTGCATATCGCCTTGACCCCCGTTACGAAGATGAACGCTGCCCGCCTTAAGTCTCCGTGG < NC_002947/2015702‑2015556 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |