New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2015671	44 (0.870)	3 (0.060)	3/248	NT	5.6%	coding (722/888 nt)	PP_1795	hypothetical protein
	?	NC_002947	= 2015702	58 (1.200)					coding (691/888 nt)	PP_1795	hypothetical protein

TGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCTGTGGAGACATTGCGGCAGG  >  NC_002947/2015523‑2015818                                                                                                                                                     |                                                                                                                                                    tGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGC                                                                                                                                                     >  8:168445‑M1/1‑149 (MQ=255)      tAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCtgt                                                                                                                                                >  8:110588/1‑149 (MQ=255)            tCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCg                                                                                                                                          >  6:2220/1‑149 (MQ=255)                cTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCAt                                                                                                                                      >  2:153434/1‑149 (MQ=255)                 tCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCAtt                                                                                                                                     >  5:30545/1‑149 (MQ=255)                        cAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCg                                                                                                                                          >  6:181858/1‑137 (MQ=255)                        cAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCGGTGGCTCg                                                                                                                                          <  5:181858/137‑1 (MQ=255)                         agagTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAaca                                                                                                                             >  5:102646/1‑149 (MQ=255)                             ttttCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAAcaccac                                                                                                                         <  6:30545/149‑1 (MQ=255)                                  ccACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGgc                                                                                                                    >  4:151894‑M2/1‑147 (MQ=255)                                      ggAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGt                                                                                                                <  6:102646/149‑1 (MQ=255)                                      ggAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTATGGCTCGGCATTGCCGAACACCACCAGGCCTGt                                                                                                                >  2:277712/1‑149 (MQ=255)                                       gagaCTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCctggtggtgttcggcaatgccgagccacagcgcctggt                                                                                                               <  7:144612‑M1/149‑39 (MQ=255)                                            ttAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGtt                                                                                                           >  3:299476/1‑148 (MQ=255)                                               aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCctggtggtgttcggcaatgccgagccacagcgcctggtc                                                                                                              >  4:154024‑M1/1‑103 (MQ=255)                                               aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCctggtggtgttcggcaatgccgagccacagcgcctggtc                                                                                                              <  3:154024‑M1/142‑40 (MQ=255)                                               aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATa                                                                                                       <  4:2526/149‑1 (MQ=255)                                               aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATa                                                                                                       <  6:166304/149‑1 (MQ=255)                                               aGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATa                                                                                                       <  3:237716/149‑1 (MQ=255)                                                      cAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTg                                                                                                <  1:153434/149‑1 (MQ=255)                                                       aGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgc                                                                                               <  5:2220/149‑1 (MQ=255)                                                       aGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgc                                                                                               <  8:246029/149‑1 (MQ=255)                                                       aGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTgc                                                                                               <  4:299476/149‑1 (MQ=255)                                                                   cGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGcc                                                                                      <  2:147544/146‑1 (MQ=255)                                                                    gTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTAc                                                                                  <  7:168445/149‑1 (MQ=255)                                                                              tCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACAccacca                                                                                                                       >  2:43077/1‑102 (MQ=255)                                                                              tCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACAccacca                                                                                                                       <  1:43077/102‑1 (MQ=255)                                                                               cAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAAc                                                                       <  7:110588/149‑1 (MQ=255)                                                                                     gATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGc                                                                 >  2:135241/1‑149 (MQ=255)                                                                                        atGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGca                                                                >  2:287537/1‑147 (MQ=255)                                                                                          gCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCAcag                                                             >  2:159012/1‑148 (MQ=255)                                                                                          gCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCAcag                                                             >  3:5177/1‑148 (MQ=255)                                                                                            aGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCCCCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCAcagcag                                                          >  7:220756/1‑149 (MQ=255)                                                                                                             gTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTGGAGCAc                                         >  2:151222/1‑149 (MQ=255)                                                                                                              ttGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCTTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCAc                                         >  1:130082/1‑148 (MQ=255)                                                                                                              ttGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACg                                        >  7:14293/1‑149 (MQ=255)                                                                                                                   ggTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTATGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGTCAGGCCTTGAGCACGAgcgc                                   <  1:277712/149‑1 (MQ=255)                                                                                                                     tGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCg                                 <  1:287537/149‑1 (MQ=255)                                                                                                                          ccATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACaa                             >  4:257729/1‑148 (MQ=255)                                                                                                                           cATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGTACACAACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACaa                             >  4:305471/1‑147 (MQ=255)                                                                                                                             tGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGt                         >  5:83643/1‑149 (MQ=255)                                                                                                                             tGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGt                         <  1:159012/149‑1 (MQ=255)                                                                                                                                  catcTGATTGGCGACTAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCtg                    >  3:115741/1‑149 (MQ=255)                                                                                                                                        aTTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCGCGAGCGCCGACAAAAGTGCCtgtg                  >  8:281806/1‑145 (MQ=255)                                                                                                                                        aTTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCtgtg                  <  4:5177/145‑1 (MQ=255)                                                                                                                                        aTTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCTGTGgaga              >  3:125511/1‑149 (MQ=255)                                                                                                                                             cGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAACCCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCTGTGCAGACATTg         >  7:150291/1‑149 (MQ=255)                                                                                                                                             cGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGa                                             <  5:129485/113‑1 (MQ=255)                                                                                                                                             cGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGa                                             >  6:129485/1‑113 (MQ=255)                                                                                                                                              gACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGgcctggtcgccaatcagatgatgcatggccccaccggcaacgagccgttggtggcgctgcatatcgccttgacccccgttacgaagatgaacgctgcccgcct               >  4:154024‑M2/1‑39 (MQ=255)                                                                                                                                              gACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGgcctggtcgccaatcagatgatgcatggccccaccggcaacgagccgttggtggcgctgcatatcgccttgacccccgttacgaagatgaacgctgcccgcct               <  3:154024‑M2/142‑104 (MQ=255)                                                                                                                                               aCCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGgcctggtcgccaatcagatgatgcatggccccaccggcaacgagccgttggtggcgctgcatatcgccttgacccccgttacgaagatgaacgctgcccgccttaagtctc       <  7:144612‑M2/149‑112 (MQ=255)                                                                                                                                                ccAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCTGTGGAGACATTGCgg      >  4:70202/1‑149 (MQ=255)                                                                                                                                                 cAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTa                                                                    <  6:4140/86‑1 (MQ=255)                                                                                                                                                 cAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACaaaa                           <  8:165666/127‑1 (MQ=255)                                                                                                                                                  aGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCTGTGGAGACATTGc        <  3:257236/145‑1 (MQ=255)                                                                                                                                                  aGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGAAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCTGTGGAGACATTGc        >  4:257236/1‑145 (MQ=255)                                                                                                                                                   ggCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCTGTGGAGACATTGCGGCAg   >  1:105921/1‑149 (MQ=255)                                                                                                                                                    gCctggtggtgttcggcaatgccgagccacagcgcctggtcgccaatcagatgatgcatggccccaccggcaacgagccgttggtggcgctgcatatcgccttgacccccgttacgaagatgaacgctgcccgccttaagtctccgtgg  >  4:151894‑M1/1‑2 (MQ=255)                                                                                                                                                     |                                                                                                                                                    TGCAATAGTGTTCTGCTCGGTTGCAGAGTTTTCCCACGGAGACTTAAGGCGGGCAGCGTTCATCTTCGTAACGGGGGTCAAGGCGATATGCAGCGCCACCAACGGCTCGTTGCCGGTGGGGCCATGCATCATCTGATTGGCGACCAGGCGCTGTGGCTCGGCATTGCCGAACACCACCAGGCCTGTCAGTTCATAGTGTTTGCGCAATGGCCCTACCAGGCTAAAACCTACGCACAGCAGCGGCAGGCCTTGAGCACGAGCGCCGACAAAAGTGCCTGTGGAGACATTGCGGCAGG  >  NC_002947/2015523‑2015818

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.