| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2175086 = | 45 (0.890) | 4 (0.090) | 4/238 | NT | 8.1% | coding (177/489 nt) | PP_1928 | arsenate reductase |
| ? | NC_002947 | 2175143 = | 49 (1.050) | coding (120/489 nt) | PP_1928 | arsenate reductase | |||||
AAAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2175241‑2175086‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagctgccAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAA > NC_002947/2175143‑2175264 AAAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGG < 3:300449/148‑1 CCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCC > 7:41452/1‑124 CCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCC < 8:41452/124‑1 CTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTG < 7:205609/93‑1 CTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTG > 8:205609/1‑93 TGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAA > 1:143075/1‑148 AGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGT < 7:195014/126‑1 AGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGT > 8:195014/1‑126 CGGGCACTGAAAACCTTGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAA < 2:143075/149‑1 AAAGTCTTGTTCATGTGCACCCACAACAGCTGCCGCAGCATCCTGTCCGAGGCGCTGTTCAATCACCTGGCCCCCGAGGGTATGGAAGCTGTGAGTTCTGGCAGCTTCCCAAGCGGCAAGGTCAATGAGCGGGCACTGAAAACCTTGGAAGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2175241‑2175086‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggaagctgccAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAACAAGACTTTCATCAGGTATCTCCGGTTCAAAA > NC_002947/2175143‑2175264 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |