New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	2175086 =	45 (0.890)	4 (0.090)	4/238	NT	8.1%	coding (177/489 nt)	PP_1928	arsenate reductase
	?	NC_002947	2175143 =	49 (1.050)					coding (120/489 nt)	PP_1928	arsenate reductase

CAGGCCCCAGTGGGCTTTGAGCGATGGACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAA  >  NC_002947/2174939‑2175232                                                                                                                                                    |                                                                                                                                                   cAGGCCCCAGTGGGCTTTGAGCGATGGACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCgg                                                                                                                                                   >  3:52870/1‑149 (MQ=255)   ggCCCCAGTGGGCTTTGAGCGATGGACCGAAGAAGATAGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCa                                                                                                                                                 <  2:179213/149‑1 (MQ=255)     ccccAGTGGGCTTTGAGCGATGGACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGc                                                                                                                                               >  6:208058/1‑149 (MQ=255)           tGGGCTTTGAGCGATGGACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCaa                                                                                                                                         <  1:30300/149‑1 (MQ=255)               cTTTGAGCGATGGACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGtt                                                                                                                                     <  1:42991/149‑1 (MQ=255)                 ttGAGCGATGGACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGtttt                                                                                                                                   >  7:20214/1‑149 (MQ=255)                  tGAGCGATGGACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGtttt                                                                                                                                   <  8:125496/148‑1 (MQ=255)                          ttttgaaccggagatacctgatgaaagtcttgttcatgtgcacccacaacagctgccgcagcatcctgtccgaggcgctgttcaatcacctggcccccgagggtatggaagctgtgagttctGGCAGCTTCCAAGGTTTTCAGTGCCCg                                                                                                                          <  2:143075‑M1/27‑1 (MQ=255)                           gACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGc                                                                                                                         >  4:271278/1‑149 (MQ=255)                                     gaTCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCa                                                                                                                                 <  4:146297/131‑1 (MQ=255)                                     gaTCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCa                                                                                                                                 >  3:146297/1‑131 (MQ=255)                                      aTCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCtt                                                                                                              >  7:181023/1‑149 (MQ=255)                                               gCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCACATTGACCTTGCCGCTTgg                                                                                                     >  5:293832/1‑149 (MQ=255)                                                cTTCGCCTGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCAGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCAAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTgg                                                                                                     >  6:183492/1‑148 (MQ=255)                                                       ggCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGTCCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGc                                                                                             <  4:19059/149‑1 (MQ=255)                                                         cAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCa                                                                                           <  1:22477/149‑1 (MQ=255)                                                          ttcatgtgcacccacaacagctgccgcagcatcctgtccgaggcgctgttcaatcacctggcccccgagggtatggaagctgtgagttctGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCa                                                                                           >  1:143075‑M1/91‑148 (MQ=255)                                                             gcgGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCACATTGACCTTGCCGCTTGGGAAGCTGCCAGAAc                                                                                       <  6:293832/149‑1 (MQ=255)                                                               ggTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACt                                                                                      >  1:169728/1‑148 (MQ=255)                                                                   acccacaacagctgccgcagcatcctgtccgaggcgctgttcaatcacctggcccccgagggtatggaagctgtgagttctGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCt                                                                                                        <  7:195014‑M1/45‑1 (MQ=255)                                                                   acccacaacagctgccgcagcatcctgtccgaggcgctgttcaatcacctggcccccgagggtatggaagctgtgagttctGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCt                                                                                                        >  8:195014‑M1/82‑126 (MQ=255)                                                                               aaCGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACGCt                                                                     >  8:147326/1‑149 (MQ=255)                                                                               aaCGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCt                                                                     >  6:6275/1‑149 (MQ=255)                                                                                    tGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCgggg                                                                <  5:208058/149‑1 (MQ=255)                                                                                     gTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGTATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCgggg                                                                <  4:71838/148‑1 (MQ=255)                                                                                         ggaggaGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCCGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAg                                                           <  2:310086/149‑1 (MQ=255)                                                                                         ggaggaGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAg                                                           <  2:305176/149‑1 (MQ=255)                                                                                            ggagAACTCTCGAAGGCATCCGAGTCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTg                                                        <  5:183492/149‑1 (MQ=255)                                                                                               gaACTCTCGAAGGCCTCCGACGCCTTGCTTGAAACCCCCGCGGCGGCGATACCGGCAGCTTCCAAGGCTTTCAGTGCCCCCTCCTTGACCCTGCCCCGTGGGCAGCGGCCAGAACTCACAGCTTCCATACCCGCCGGGGCCACGCGAtt                                                     <  2:169728/149‑1 (MQ=255)                                                                                                   tctcGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGAtt                                                     <  2:6289/145‑1 (MQ=255)                                                                                                   tctcGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGAtt                                                     >  1:6289/1‑145 (MQ=255)                                                                                                          ggCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAgg                                                          >  1:269977/1‑133 (MQ=255)                                                                                                          ggCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAgg                                                          <  2:269977/133‑1 (MQ=255)                                                                                                             aTCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCg                                        >  4:142740/1‑148 (MQ=255)                                                                                                               ccGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCCTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGa                                      >  2:171552/1‑148 (MQ=255)                                                                                                                 gAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAg                                   >  8:121375/1‑149 (MQ=255)                                                                                                                 gAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAg                                   <  8:178740/149‑1 (MQ=255)                                                                                                                  aGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAg                                   >  1:245800/1‑148 (MQ=255)                                                                                                                    gCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCAGACAGGAt                                <  8:20214/149‑1 (MQ=255)                                                                                                                      cttgcttgAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAAc                                                 <  5:96026/130‑1 (MQ=255)                                                                                                                      cttgcttgAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAAc                                                 >  6:96026/1‑130 (MQ=255)                                                                                                                      cttgcttgAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGAtgc                              >  7:61488/1‑149 (MQ=255)                                                                                                                         gcttgAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCGGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGAtgctg                            <  8:181023/148‑1 (MQ=255)                                                                                                                          cttgAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGAtgctgc                           <  3:271278/148‑1 (MQ=255)                                                                                                                           ttgAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCgg                         >  3:266588/1‑149 (MQ=255)                                                                                                                            tgAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGc                        >  8:138956/1‑149 (MQ=255)                                                                                                                             gAAAGAGCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCgg                         <  4:52870/147‑1 (MQ=255)                                                                                                                              aaaGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAg                      >  5:59674/1‑149 (MQ=255)                                                                                                                                      gCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTtgtg              <  2:245800/149‑1 (MQ=255)                                                                                                                                       cGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTgg             <  5:54137/149‑1 (MQ=255)                                                                                                                                        ggTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTggg            <  7:121375/149‑1 (MQ=255)                                                                                                                                                  ccGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGa   <  4:266588/148‑1 (MQ=255)                                                                                                                                                   cGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGaa  >  2:256814/1‑148 (MQ=255)                                                                                                                                                    GGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCgg                         >  7:41452‑M1/1‑124 (MQ=255)                                                                                                                                                    GGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCgg                         <  8:41452‑M1/124‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CAGGCCCCAGTGGGCTTTGAGCGATGGACCGAAGAAGATCGGGCAGGCTTCGCCGGCAGCGCGGTCGCACACGGTGACAACGATGTCGGGAGGAGAACTCTCGAAGGCATCCGAGGCCTTGCTTGAAAGACCAGCGGTGGGGATACCGGCAGCTTCCAAGGTTTTCAGTGCCCGCTCATTGACCTTGCCGCTTGGGAAGCTGCCAGAACTCACAGCTTCCATACCCTCGGGGGCCAGGTGATTGAACAGCGCCTCGGACAGGATGCTGCGGCAGCTGTTGTGGGTGCACATGAA  >  NC_002947/2174939‑2175232

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.