New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2373103	48 (0.950)	4 (0.080)	4/246	NT	7.7%	intergenic (‑125/‑67)	PP_2081/ppsA	phosphoenolpyruvate synthase regulatory protein/phosphoenolpyruvate synthetase
	?	NC_002947	= 2373123	50 (1.040)					intergenic (‑145/‑47)	PP_2081/ppsA	phosphoenolpyruvate synthase regulatory protein/phosphoenolpyruvate synthetase

AGATGAAGAACGCGGTTCGTTTCATTTGCGATCTGGGCCTTAAGCTGATGACGATTCTTGGATATGATAAGTTCGGTTTGCCGAATGCGGCTGTCGACATTCTGCCACATTTGCAGCGCCTATTTTCCAGGTACAGGCCACAAACGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2372954‑2373103 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgCCTGTCTTCTATGACTTGGCCGGGCGTTTGTGGCCTGTACCTGGAAAATAGGCGCTGCAAATGTGGCAGAATGTCGACAGCCGCATTCGGCAAACCGAACTTATCATATCCAAGAATCGTCATCAGCTTAAGGCCCAGATCGCAAAT  <  NC_002947/2373123‑2372977                                                                                                                                                                                                                                                                                                           AGATGAAGAACGCGGTTCGTTTCATTTGCGATCTGGGCCTTAAGCTGATGACGATTCTTGGATATGATAAGTTCGGTTTGCCGAATGCGGCTGTCGACATTCTGCCACATTAGAAGCCCCTATTTTCCAGGTACAGGCCACAAACGCCC                                                                                                                                                      >  6:191635/1‑149      AAGAACGCGGTTCGTTTCATTTGCGATCTGGGCCTTAAGCTGATGACGATTCTTGGATATGATAAGTTCGGTTTGCCGAATGCGGCTGTCGACATTCTGCCACATTTGCAGCGCCTATTTTCCAGGTACAGGCCACAAACGCCCGCaa                                                                                                                                                  <  2:45329/148‑3                           TGCGATCTGGGCCTTAAGCTGATGACGATTCTTGGATATGATAAGTTCGGTTTGCCGAATGCGGCTGTCGACATTCTGCCACATTTGCAGCGCCTATTTTCCAGGTACAGGCCACAAACGCCCGCCTGTCTTCTATGACTTGGCCGGGC                                                                                                                            >  4:19466/1‑149                                    GGCCTTAAGCTGATGACGATTCTTGGATATGATAAGTTCGGTTTGCCGAATGCGGCTGTCGACATTCTGCCACATTTGCAGCGCCTATTTTCCAGGTACAGGCCACAAACGCCCGCCTGTCTTCTATGACTTGGCCGGGCGTTTG                                                                                                                       <  3:19466/145‑1                                                                                 CCGAATGCGGCTGTCGACATTCTGCCACATTTGCAGCGCCTATTTTCCAGGTACAGGCCACAAACGCCCGCCTGTCTTCTATGACTTGGCCGGGCGTTTGTG                                                                                                                     >  5:236311/1‑102                                                                                 CCGAATGCGGCTGTCGACATTCTGCCACATTTGCAGCGCCTATTTTCCAGGTACAGGCCACAAACGCCCGCCTGTCTTCTATGACTTGGCCGGGCGTTTGTG                                                                                                                     <  6:236311/102‑1                                                                                                                                                 CGCCCGCCTGTCTTCTATGACTTGGCCGGGCGTTTGTGGCCTGTACCTGGAAAATAGGCGCTGCAAATGTGGCAGAATGTCGACAGCCGCATTCGGCAAACCGAACTTATCATATCCAAGAATCGTCATCAGCTTAAGGCCCAGATCGC      <  4:110676/149‑1                                                                                                                                                    CCGCCTGTCTTCTATGACTTGGCCGGGCGTTTGTGGCCTGTACCTGGAAAATAGGCGCTGCAAATGTGGCAGAATGTCGACAGCCGCATTCGGCAAACCGAACTTATCATATCCAAGAATCGTCATCAGCTTAAGGCCCAGATCGCAAA   <  5:128552/149‑1                                                                                                                                                     CGCCTGTCTTCTATGACTTGGCCGGGCGTTTGTGGCCTGTACCTGGAAAATAGGCGCTGCAAATGTGGCAGAATGTCGACAGCCGCATTCGGCAAACCGAACTTATCATATCCAAGAATCGTCATCAGCTTAAGGCCCAGATCGCAAAT  >  2:19845/1‑149                                                                                                                                                      GCCTGTCTTCTATGACTTGGCCGGGCGTTTGTGGCCTGTACCTGGAAAATAGGCGCTGCAAATGTGGCAGAATGTCGACAGCCGCATTCGGCAAACCGAACTTATCATATCCAAGAATCGTCATCAGCTTAAGGCCCAGATCGCAAAT  >  5:332718/1‑148                                                                                                                                                                                                                                                                                                           AGATGAAGAACGCGGTTCGTTTCATTTGCGATCTGGGCCTTAAGCTGATGACGATTCTTGGATATGATAAGTTCGGTTTGCCGAATGCGGCTGTCGACATTCTGCCACATTTGCAGCGCCTATTTTCCAGGTACAGGCCACAAACGCCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2372954‑2373103 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccgCCTGTCTTCTATGACTTGGCCGGGCGTTTGTGGCCTGTACCTGGAAAATAGGCGCTGCAAATGTGGCAGAATGTCGACAGCCGCATTCGGCAAACCGAACTTATCATATCCAAGAATCGTCATCAGCTTAAGGCCCAGATCGCAAAT  <  NC_002947/2373123‑2372977

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.