New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 3106944 | 41 (0.810) | 4 (0.080) | 4/248 | NT | 9.2% | coding (404/1284 nt) | arsB‑II | arsenite/antimonite transporter |
? | NC_002947 | = 3106975 | 40 (0.830) | coding (373/1284 nt) | arsB‑II | arsenite/antimonite transporter |
GATGTTCACCGGCACCATCACCGATGCGTATTCGGCGAAGCCCAGGCCGAAGTAGTCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3106796‑3106944 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgATGCTGCTCGCGCTGCGCTTCTCACCTGCAGCGACAC < NC_002947/3106975‑3106939 GATGTTCACCGGCACCATCACCGATGCGTATTCGGCGAAGCCCAGGCCGAAGTAGTCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCG > 1:113766/1‑149 CGGCGAAGCCCAGGCCGAAGTAGTCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGATGCTGCTCGCGCTGCGCTTCTCACCTGCAG < 4:303325/148‑1 AAGCCCAGGCCGAAGTAGTCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCGAGTGTCGATGCTGCTCGCGCTGCGCTTCTCACCTGCAGCGACAC < 6:238135/149‑1 CAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGATGCTGCTCGCGCTGCGCTTCTCACCTGC < 5:223868/103‑1 CAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGATGCTGCTCGCGCTGCGCTTCTCACCTGC > 6:223868/1‑103 GATGTTCACCGGCACCATCACCGATGCGTATTCGGCGAAGCCCAGGCCGAAGTAGTCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3106796‑3106944 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgATGCTGCTCGCGCTGCGCTTCTCACCTGCAGCGACAC < NC_002947/3106975‑3106939 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |