New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3106944	41 (0.810)	4 (0.080)	4/248	NT	9.2%	coding (404/1284 nt)	arsB‑II	arsenite/antimonite transporter
	?	NC_002947	= 3106975	40 (0.830)					coding (373/1284 nt)	arsB‑II	arsenite/antimonite transporter

AGGCCGAAGTAGTCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAATGCGGCCCATTCGAAG  >  NC_002947/3106839‑3107123                                                                                                                                         |                                                                                                                                                     aGGCCGAAGTATTTGGCAGAGACGATGTTGACCATGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCAGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGAt                                                                                                                                          <  4:213848/149‑1 (MQ=255)  ggCCGAAGTAGTCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATg                                                                                                                                         >  5:229192/1‑149 (MQ=255)            gtCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGAt                                                                                                                                          <  4:3082/138‑1 (MQ=255)            gtCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGAt                                                                                                                                          >  3:3082/1‑138 (MQ=255)               ggCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGAt                                                                                                                              >  6:244678/1‑147 (MQ=255)                gCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGAAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAg                                                                                                                           >  8:51925/1‑149 (MQ=255)                    agaCGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGcgcc                                                                                                                       <  4:20749/149‑1 (MQ=255)                       cGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATg                                                                                                                                               >  4:227875/1‑122 (MQ=255)                       cGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATg                                                                                                                                               <  3:227875/122‑1 (MQ=255)                          tGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACcg                                                                                                                 >  5:323931/1‑149 (MQ=255)                                 cAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTgg                                                                                                          >  8:53939/1‑149 (MQ=255)                                  aGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTggt                                                                                                         <  5:244678/149‑2 (MQ=255)                                        gagaCCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAg                                                                                                   >  6:3971/1‑149 (MQ=255)                                             caccaGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGcc                                                                                               >  2:69612/1‑148 (MQ=255)                                                       aGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAgcggc                                                                                    <  6:323931/149‑1 (MQ=255)                                                       aGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAgcggc                                                                                    <  7:53939/149‑1 (MQ=255)                                                         gCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGgcgc                                                                                  <  6:229192/149‑1 (MQ=255)                                                                     ggCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGc                                                                      <  5:175815/149‑1 (MQ=255)                                                                          tGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGGCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAg                                                                 >  3:163548/1‑149 (MQ=255)                                                                               ccTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGaa                                                            >  8:119612/1‑149 (MQ=255)                                                                                   ctgcCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAgg                                                        <  4:183855/149‑1 (MQ=255)                                                                                      ccATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCgg                                                     >  6:212823/1‑149 (MQ=255)                                                                                       cATGACAAAGGGCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCgg                                                     <  5:96451/148‑1 (MQ=255)                                                                                        aTGACAAAGTCGAGTTTGGCTGCAGGTGAGAAGCGCAGGGCGAGCAGCTTCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTg                                                   <  7:51925/149‑1 (MQ=37)                                                                                        aTGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTg                                                   >  5:231671/1‑149 (MQ=255)                                                                                           aCAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGCGCAGTACGCAGAAGGCGAACAGGCGGTGGcc                                                >  4:242608/1‑149 (MQ=255)                                                                                           aCAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGc                                                 <  1:69612/148‑1 (MQ=255)                                                                                            cAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCg                                               >  5:36908/1‑149 (MQ=255)                                                                                              aaGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCt                                             >  6:259905/1‑149 (MQ=255)                                                                                                    aGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGtt                                       >  2:215401/1‑149 (MQ=255)                                                                                                     gtgtCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATcgacactcgcctttgtcatggcagcaggcttcattgccgacacggcaagcctgccgctggtggtctccaacctggtcaacatcgtctcggccgactacttcggcctgggctt                                      <  6:238135‑M2/149‑113 (MQ=255)                                                                                                           cTGCAGGTGAGAAGCGCAGCGCGAGCAGCATcgacactggcctttgtcatggcagcaggcttcattgccgacacggcaagcctgccgctggtggtctccaacctggtcaacatcgtctcggccgactacttcggcctgggcttcgccg                                 <  4:303325‑M2/148‑118 (MQ=255)                                                                                                            tGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGc                               >  2:262226/1‑149 (MQ=255)                                                                                                             gCAGGTGAGAAGCGCAGCGCGAGCAGCATcgacactggcctttgtcatggcagcaggcttcattgccgacacggcaagcctgccgctggtggtctccaacctg                                                                            <  5:223868‑M2/103‑75 (MQ=255)                                                                                                             gCAGGTGAGAAGCGCAGCGCGAGCAGCATcgacactggcctttgtcatggcagcaggcttcattgccgacacggcaagcctgccgctggtggtctccaacctg                                                                            >  6:223868‑M2/1‑29 (MQ=255)                                                                                                              cAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGt                             >  3:135182/1‑149 (MQ=255)                                                                                                              cAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGt                             >  3:60815/1‑149 (MQ=255)                                                                                                              cAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGt                             >  4:199454/1‑149 (MQ=255)                                                                                                               aGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGATGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTg                            >  8:106213/1‑149 (MQ=255)                                                                                                                  tGAGAAGCGCAGCGCGATCATCATCGAAATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCca                         <  4:163548/149‑1 (MQ=255)                                                                                                                    agaAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGccgc                        <  6:231671/148‑3 (MQ=255)                                                                                                                     gaAGCGCAGCGCTAGCAGGATCGACCTGACGATGGGTGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACAt                      <  4:135182/149‑1 (MQ=255)                                                                                                                          gcagcgcGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAAt                 <  1:215401/149‑1 (MQ=255)                                                                                                                           cagcgcGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAATg                <  6:36908/149‑1 (MQ=255)                                                                                                                           cagcgcGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAATg                <  3:199454/149‑1 (MQ=255)                                                                                                                             gcgcGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGATGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAATGCg              <  7:106213/149‑1 (MQ=255)                                                                                                                                      gcaTCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAATGCGGCCCATTc      >  6:154663/1‑148 (MQ=255)                                                                                                                                       caTCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTg                                                   >  2:152454/1‑102 (MQ=255)                                                                                                                                       caTCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTg                                                   <  1:152454/102‑1 (MQ=255)                                                                                                                                        aTCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAATGCGGCCCATTCgaa   <  5:212823/149‑1 (MQ=255)                                                                                                                                         tCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAATGCGGCCCATTCgaag  <  4:60815/149‑1 (MQ=255)                                                                                                                                         |                                                                                                                                                     AGGCCGAAGTAGTCGGCCGAGACGATGTTGACCAGGTTGGAGACCACCAGCGGCAGGCTTGCCGTGTCGGCAATGAAGCCTGCTGCCATGACAAAGGCCAGTGTCGCTGCAGGTGAGAAGCGCAGCGCGAGCAGCATCGACATGACGATGGGGGTGAGGATCAGCGCCGCACCGTCGTTGGCGAACAGCGCCGATACAGCGGCGCCGAGCAGTACGCAGAAGGCGAACAGGCGGTGGCCGCTGCCGTTTGCCCAGCGTGCCACATGCAATGCGGCCCATTCGAAG  >  NC_002947/3106839‑3107123

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.