New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3129186	48 (0.950)	3 (0.060)	3/244	NT	6.3%	coding (433/1410 nt)	dmoA‑I	dimethyl‑sulfide monooxygenase
	?	NC_002947	= 3129217	44 (0.920)					coding (464/1410 nt)	dmoA‑I	dimethyl‑sulfide monooxygenase

GCTGGTTACCGAGCACCTCGGTTTTGGCCTCACCGCCTCGCTGACTTTCGAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3129032‑3129186 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcaTCGTGGTCGCTCAGCGCCTTCTGCCCGAGGTTGCGCGCGCCGCTGTCGAGGTAGGAGGTAACGATGTTCCAGCCGATGCGCCCCTTGGTCAGGTGATCCAGGGTCGACAGGCGCCGGGCGAACGGATACGGGTGCTCGAAA  <  NC_002947/3129217‑3129077                                                                                                                                                                                                                                                                                                          GCTGGTTACCGAGCACCTCGGTTTTGGCCTCACCGCCTCGCTGACTTTCGAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACATCCTACCTCGACAGCGGCG                                                                                                                                                     >  2:236607/1‑149                                                  GAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGTGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCATCGTGGTCGCTCAGCGCCTTCTGCCCGAGGTTGCGCGCGCCGC                                                                                                    <  4:266113/149‑1                                                                                  GACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCATCGTGGTCGCTCAGCGCCTTCTGCCCGAGGTTGCGCGCGC                                                                                                       <  3:651/114‑1                                                                                  GACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCATCGTGGTCGCTCAGCGCCTTCTGCCCGAGGTTGCGCGCGC                                                                                                       >  4:651/1‑114                                                                                                                                                     GCGCGCATCGTTGTCGCTCAGCGCCTTCTGCCCGAGGTTGCGCGCGCCGCTGGCGAGGTAGGAGGTAACGATGTTCCAGCCGATGCGCCCCTTGGTCAGGTGATCCAGGGTCGACAGGCGCCGGGCGAACGGATACGGGTGCTCGAAA  <  6:233500/148‑1                                                                                                                                                     GCGCGCATCGTGGTCGCTCAGCGCCTTCTGCCCGAGGTTGCGCGCGCCGCTGTCGAGGTAGGAGGTAACGATGTTCCAGCCGATGCGCCCCTTGGTCAGGTGATCCAGGGTCGACAGGCGCCGGGCGAACGGATACGGGTGCTCGAAA  <  4:210883/148‑1                                                                                                                                                     GCGCGCATCGTGGTCGCTCAGCGCCTTCTGCCCGAGGTTGCGCGCGCCGCTGTCGAGGTAGGAGGTAACGATGTTCCAGCCGATGCGCCCCTTGGTCAGGTGATCCAGGGTCGACAGGCGCCGGGCGAACGGATACGGGTGCTCGAAA  <  6:58815/148‑1                                                                                                                                                                                                                                                                                                          GCTGGTTACCGAGCACCTCGGTTTTGGCCTCACCGCCTCGCTGACTTTCGAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/3129032‑3129186 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcgcaTCGTGGTCGCTCAGCGCCTTCTGCCCGAGGTTGCGCGCGCCGCTGTCGAGGTAGGAGGTAACGATGTTCCAGCCGATGCGCCCCTTGGTCAGGTGATCCAGGGTCGACAGGCGCCGGGCGAACGGATACGGGTGCTCGAAA  <  NC_002947/3129217‑3129077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.