New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 3129186	48 (0.950)	3 (0.060)	3/244	NT	6.3%	coding (433/1410 nt)	dmoA‑I	dimethyl‑sulfide monooxygenase
	?	NC_002947	= 3129217	44 (0.920)					coding (464/1410 nt)	dmoA‑I	dimethyl‑sulfide monooxygenase

TTTCGAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGC  >  NC_002947/3129077‑3129353                                                                                                                                             |                                                                                                                                         tttCGAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGCCAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACAACGAtgcgcgc                                                                                                                                   <  6:233500‑M2/148‑8 (MQ=255) tttCGAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGAtgcgcgc                                                                                                                                   <  4:210883‑M2/148‑8 (MQ=255) tttCGAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGAtgcgcgc                                                                                                                                   <  6:58815‑M2/148‑8 (MQ=255)         aCCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTAc                                                                                                                          <  1:236607/149‑1 (MQ=255)           ccGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTAcgc                                                                                                                        >  2:303610/1‑149 (MQ=255)                         ccGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTg                                                                                                          <  3:4527/149‑1 (MQ=255)                                cTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGct                                                                                                   <  3:252338/149‑1 (MQ=255)                                    cGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTa                                                                                                >  2:18215/1‑148 (MQ=255)                                       accTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCTCGATGCGCGCTACGACTACGCGGACGAATACCTTg                                                                                                          <  4:68343/134‑1 (MQ=255)                                            gATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGtt                                                                                       >  7:38610/1‑149 (MQ=255)                                             aTCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTc                                                                                      <  8:257024/149‑1 (MQ=255)                                              tCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCg                                                                                     <  1:18215/149‑1 (MQ=255)                                                 ccTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAg                                                                                  <  3:210883/149‑1 (MQ=255)                                                 ccTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAg                                                                                  >  5:262626/1‑149 (MQ=255)                                                       cAAGGGGCGCATCGGCTGGAACATCGTTACGTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCt                                                                            >  1:30000/1‑149 (MQ=255)                                                       cAAGGGGCGCATCGGCTCGAACATCGTTACCTCCAACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGCCCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCt                                                                            >  6:94421/1‑149 (MQ=255)                                                          ggggCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTggg                                                                         <  4:156740/149‑1 (MQ=255)                                                          ggggCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTgg                                                                          >  8:235826/1‑148 (MQ=255)                                                            ggCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGaa                                                                       <  4:148400/149‑1 (MQ=255)                                                            ggCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGaa                                                                       <  6:262626/149‑1 (MQ=255)                                                             gcgcATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAggg                                                                                <  5:315513/139‑1 (MQ=255)                                                             gcgcATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAggg                                                                                >  6:315513/1‑139 (MQ=255)                                                                     gCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCt                                                              >  7:301938/1‑149 (MQ=255)                                                                     gCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCt                                                              >  5:232999/1‑149 (MQ=255)                                                                     gCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCt                                                              >  2:232672/1‑149 (MQ=255)                                                                      cTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCtg                                                             <  5:58815/149‑1 (MQ=255)                                                                          aaCATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAg                                                                                                       >  2:42972/1‑103 (MQ=255)                                                                          aaCATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAg                                                                                                       <  1:42972/103‑1 (MQ=255)                                                                                   aCCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATcg                                                >  3:303836/1‑149 (MQ=255)                                                                                   aCCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATc                                                 <  1:303610/148‑1 (MQ=255)                                                                                        ctACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAgc                                           >  3:305848/1‑149 (MQ=255)                                                                                            cTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCgg                                       <  6:232999/149‑1 (MQ=255)                                                                                             tCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCgg                                       >  2:288975/1‑148 (MQ=255)                                                                                               gACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGGTGCGGGATCGCGAGCGCGGCAt                                    <  5:94421/149‑1 (MQ=255)                                                                                                   gcggcgCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGAtgcgcgcgccgctgtcgaggtaggaggtaacgatgttccagccgatgcgcaccttggtcaggtgatccagggtcgacaggcgccgggcgaacggatacgggtgctc                                <  4:266113‑M2/149‑107 (MQ=255)                                                                                                   gcggcgCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTc                                <  1:232672/149‑1 (MQ=255)                                                                                                     ggcgCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAg                              <  7:235826/149‑1 (MQ=255)                                                                                                     ggcgCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAg                              <  2:92829/149‑1 (MQ=255)                                                                                                      gcgcgcgcAACCTCGGGCAGAAGGCGCTGAGCGACCACGAtgcgcgcgccgctgtcgaggtaggaggtaacgatgttccagccgatgcgccccttggtcaggtgatccagggtc                                                                >  4:651‑M2/1‑40 (MQ=255)                                                                                                      gcgcgcgcAACCTCGGGCAGAAGGCGCTGAGCGACCACGAtgcgcgcgccgctgtcgaggtaggaggtaacgatgttccagccgatgcgccccttggtcaggtgatccagggtc                                                                <  3:651‑M2/114‑75 (MQ=255)                                                                                                             cAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGc                             <  7:140380/142‑1 (MQ=255)                                                                                                             cAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGc                             >  8:140380/1‑142 (MQ=255)                                                                                                              aaCCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAg                                                                                                       >  4:85918/1‑67 (MQ=255)                                                                                                              aaCCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAg                                                                                                       <  3:85918/67‑1 (MQ=255)                                                                                                                      gCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGtt              >  3:174769/1‑148 (MQ=255)                                                                                                                      gCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTc             <  4:305848/149‑1 (MQ=255)                                                                                                                         gAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATg          <  8:301938/149‑1 (MQ=255)                                                                                                                          aaGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCAt           >  2:69508/1‑147 (MQ=255)                                                                                                                            ggCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATgaga       >  8:83326/1‑149 (MQ=255)                                                                                                                                  gAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGc  >  1:13849/1‑148 (MQ=255)                                                                                                                                             |                                                                                                                                         TTTCGAGCACCCGTATCCGTTCGCCCGGCGCCTGTCGACCCTGGATCACCTGACCAAGGGGCGCATCGGCTGGAACATCGTTACCTCCTACCTCGACAGCGGCGCGCGCAACCTCGGGCAGAAGGCGCTGAGCGACCACGATGCGCGCTACGACTACGCGGACGAATACCTTGAAGTGCTCTACAAGCTGTTCGAAGGGAGCTGGGAAGAGGGCGCTGTGCTGCGGGATCGCGAGCGCGGCATTTTCAGCGATCCGAACAAGGTTCATGAGATCCGC  >  NC_002947/3129077‑3129353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.