| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3361090 = | 51 (1.010) | 5 (0.110) | 4/238 | NT | 9.9% | coding (177/1581 nt) | PP_2956 | ribosomal protein S6 modification protein‑like protein |
| ? | NC_002947 | 3361133 = | 44 (0.950) | coding (134/1581 nt) | PP_2956 | ribosomal protein S6 modification protein‑like protein | |||||
TGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3361131‑3361090‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcccagTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGATCCC > NC_002947/3361133‑3361280 TGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGA < 1:150298/112‑1TGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGA > 2:150298/1‑112 GGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGG < 3:123259/112‑1 GGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGG < 3:127961/112‑1 GGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGG > 4:127961/1‑112 GCTGGCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTA > 5:57567/1‑149 GCCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTC > 5:323663/1‑148 CCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATG < 6:181474/140‑1 CCCAGTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGACAATACTTCGGCCACGTTGGCTTGCACCGCTGACATG > 5:181474/1‑140 GTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGATCCC > 7:151258/1‑149 TGGGCCAGCTACTTTCCCAGCGAGAGCCTGATGCTGGCCCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3361131‑3361090‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctggcccagTCTTCCTTGCGCTCCACCACGATCAGCAAGCGGTTACCGGCGCTCCGCTTACTGGGTGGCTCCTCGGAGAGGGTTATTGTGGAAACTTCGGTTTTGGCCAATACTTCGGCCACGTTGGCTTGCACCGCTGACATGAGTATTCGATCCC > NC_002947/3361133‑3361280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |