| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3377448 = | 50 (0.990) | 3 (0.060) | 3/244 | NT | 6.2% | coding (568/906 nt) | tnpB | transposase subunit B |
| ? | NC_002947 | 3377486 = | 43 (0.900) | coding (606/906 nt) | tnpB | transposase subunit B | |||||
AGGCCGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3377599‑3377448‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGC > NC_002947/3377486‑3377631 AGGCCGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCTACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGG < 8:34768/149‑1 CGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCT > 6:85459/1‑147 ATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTC > 3:264688/1‑143 ATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTC < 4:264688/143‑1 TGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTT > 7:152588/1‑102 TGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTT < 8:152588/102‑1 AGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGC > 2:10422/1‑149 GGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAG < 7:176997/149‑1 GCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGG < 6:270084/149‑1 CTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGC < 6:18596/149‑1 TCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGA < 1:305421/124‑1 TCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGA > 2:305421/1‑124 CGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAA < 1:199770/128‑1 CGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAA > 2:199770/1‑128 AGGCCGTTGATGGTCTCTGCCAGTGCGTTGTCGTAGCTGTCACCGGTATTGCCAACCGAGGGTTCGATGCCAGCTTCGCCCAGCCGCTCGCTGTAGCGAATCGACAGATATTGCGAGCCCCTATCGCTGTGATGAACCAGCCGGTGGGGCTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3377599‑3377448‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggggctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGC > NC_002947/3377486‑3377631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |