| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3377448 = | 50 (0.990) | 3 (0.060) | 3/244 | NT | 6.2% | coding (568/906 nt) | tnpB | transposase subunit B |
| ? | NC_002947 | 3377486 = | 43 (0.900) | coding (606/906 nt) | tnpB | transposase subunit B | |||||
ATCGTCGATGTCTACTCACGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGC > NC_002947/3377340‑3377631 | aTCGTCGAAGTCTACTCACGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGc < 5:166226/148‑1 (MQ=255) gTCTACTCACGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGt < 6:210540/148‑1 (MQ=255) gTCTACTCACGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGt > 5:210540/1‑148 (MQ=255) cTCACGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGAtt < 3:185101/148‑1 (MQ=255) cTCACGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTc > 4:270688/1‑149 (MQ=255) aCGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGc > 2:59553/1‑148 (MQ=255) aCGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGc > 2:132716/1‑148 (MQ=255) tttATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTa < 1:172672/146‑1 (MQ=255) tttATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTa > 2:172672/1‑146 (MQ=255) tAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCgg > 8:83325/1‑149 (MQ=255) gCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTg > 5:106514/1‑149 (MQ=255) cTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTgg > 3:293266/1‑149 (MQ=255) cTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTgg < 3:270688/149‑1 (MQ=255) gcatgtgtCGGCTGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTggg > 7:112848/5‑149 (MQ=255) gCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTggg < 3:15460/147‑1 (MQ=255) gCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTggg > 4:15460/1‑147 (MQ=255) gCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTgg > 4:165344/1‑148 (MQ=255) aaccgagggttcgatgccagcttcgcccagccgctcgctgtagcgaatcgacagatattgcGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCa < 8:152588‑M1/41‑1 (MQ=255) aaccgagggttcgatgccagcttcgcccagccgctcgctgtagcgaatcgacagatattgcGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCa > 7:152588‑M1/62‑102 (MQ=255) gcgcACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCt > 8:176997/1‑149 (MQ=255) gcACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCg > 7:160143/1‑149 (MQ=255) caGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGtt < 8:112848/149‑1 (MQ=255) agTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGc < 3:249339/149‑1 (MQ=255) cTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCgg > 5:116278/1‑149 (MQ=255) cTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCg < 8:160143/148‑1 (MQ=255) tctGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCa < 2:28957/72‑1 (MQ=255) tctGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCa > 1:28957/1‑72 (MQ=255) tGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCTCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCgg < 5:225499/139‑1 (MQ=255) tGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCCGTTCGCAATCACGGtagagagg > 6:225499/1‑140 (MQ=255) aGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAAc < 4:90687/149‑1 (MQ=255) aGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAAc < 6:106514/149‑1 (MQ=255) gcgcTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCt > 8:295278/1‑115 (MQ=255) gcgcTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCt < 7:295278/115‑1 (MQ=255) acacTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCaa < 6:320180/118‑1 (MQ=255) acacTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCaa > 5:320180/1‑118 (MQ=255) acacTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGc < 5:23659/148‑1 (MQ=255) acTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCa > 5:270084/1‑147 (MQ=255) tcgGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACa > 8:74876/1‑131 (MQ=255) tcgGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACa < 7:74876/131‑1 (MQ=255) tcgGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTgg > 5:247824/1‑140 (MQ=255) tcgGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTgg < 6:247824/140‑1 (MQ=255) cgGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCa > 6:17947/1‑148 (MQ=255) tgcgagcccctatcgctgtgatgaaccagccggtggggctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGtt < 8:152588‑M2/61‑1 (MQ=255) tgcgagcccctatcgctgtgatgaaccagccggtggggctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGtt > 7:152588‑M2/42‑102 (MQ=255) ccTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCaa < 1:132716/149‑1 (MQ=255) GAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCAt > 3:264688‑M1/1‑143 (MQ=255) GAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCAt < 4:264688‑M1/143‑1 (MQ=255) agcccctatcgctgtgatgaaccagccggtggggctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGc > 2:10422‑M2/38‑149 (MQ=255) AGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACg > 6:85459‑M1/1‑147 (MQ=255) CCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTAGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCct < 8:34768‑M1/149‑1 (MQ=255) cTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGAc < 7:83325/149‑1 (MQ=255) atcaCAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACt > 2:240884/1‑148 (MQ=255) acaGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATc < 3:165344/149‑1 (MQ=255) acaGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATc > 2:137959/1‑149 (MQ=255) aGCGATAGGGGCTAGAAATATCTGTAGATTAGATACAGCTAGCTGCTGGGAGAAGCTGGAATCGAAACCTCGGTTGTCAATACCTGTGAAAGATAAGACAACGCACTTGAAGAGACCATCAACGGCCTCTACAAGACCTAACTGATCCa > 1:45488/1‑149 (MQ=255) cGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCctc < 2:271954/127‑1 (MQ=255) aTAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAg < 1:240884/149‑1 (MQ=255) gggctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAg < 7:176997‑M2/143‑1 (MQ=255) gctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAggg < 6:270084‑M2/145‑1 (MQ=255) ctcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGc < 6:18596‑M2/146‑1 (MQ=255) tcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGa < 1:305421‑M2/122‑1 (MQ=255) tcGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGa > 2:305421‑M2/3‑124 (MQ=255) cGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGaa < 1:199770‑M2/127‑1 (MQ=255) cGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGaa > 2:199770‑M2/2‑128 (MQ=255) | ATCGTCGATGTCTACTCACGGTTTATCGTAGGCTGGCGTGTCAGCCGACACATGCGCACAGAGTTTGTTCTGGATGCTCTGGAACAGGCGCTTCACACTCGTCGGCCTGAGCCCCACCGGCTGGTTCATCACAGCGATAGGGGCTCGCAATATCTGTCGATTCGCTACAGCGAGCGGCTGGGCGAAGCTGGCATCGAACCCTCGGTTGGCAATACCGGTGACAGCTACGACAACGCACTGGCAGAGACCATCAACGGCCTCTACAAGACCGAACTGATCCATAAGCGAGGGC > NC_002947/3377340‑3377631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |