| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3443566 = | 9 (0.180) | 3 (0.060) | 3/246 | NT | 19.0% | coding (2325/3270 nt) | PP_3062 | tail length determination protein |
| ? | NC_002947 | 3443605 = | 17 (0.350) | coding (2364/3270 nt) | PP_3062 | tail length determination protein | |||||
CGCTTTACCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3443617‑3443566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGA > NC_002947/3443605‑3443712 CGCTTTACCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGG < 1:24429/138‑1CGCTTTACCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGG > 2:24429/1‑138 GTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGCACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGA > 2:7756/1‑149 CGCTTTACCCAGTGCCGGCGGCGATTCCGGCTCGGCTTGATCGTCGGCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3443617‑3443566‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccggcACTGGGTAAAGCGTTACGCGTAACGGTGATGCCAGCCAAGGAAGTCGAGCCTGAGCCCGCCACGGCTCCGGTCAAGGCTGATCCGGCAGTGTCGTATGATCCGCGCGA > NC_002947/3443605‑3443712 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |