New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3487360 = | 65 (1.290) | 5 (0.100) | 5/248 | NT | 8.5% | coding (651/1344 nt) | PP_3093 | hypothetical protein |
? | NC_002947 | 3487396 = | 45 (0.930) | coding (615/1344 nt) | PP_3093 | hypothetical protein |
ACTGCCCTCTGGCCAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3487511‑3487360 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTCGAC > NC_002947/3487396‑3487542 ACTGCCCTCTGGCCAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAG > 3:10333/1‑149 TGCCCTCTGGCCAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGC > 2:84411/1‑149 GGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGC > 1:33560/1‑147 CTGCTCGGCGCCCTGCAGGCCAAGAGC‑AGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGT < 5:243151/148‑1 CTGCTCGGCGCCCTGCAGGCCAAGAGC‑AGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGT > 6:243151/1‑148 TGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGT > 1:159976/1‑103 TGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGT < 2:159976/103‑1 AGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTC > 1:17323/1‑149 CGTTTGCCGATGCCGGCAATGGTCTCGGGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTCGAC < 3:53870/149‑1 ACTGCCCTCTGGCCAAGCTGACACGCAACAGCATGGGCGGTTTCAACCTTGACCCGCATTTCGTCCACCCCACCTTGCACCTGGGCAGCCACGAGACCATTGCCGGCATCGGCAAACGCCTGCTCGGCGCCCTGCAGGCCAAGAGCAAGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3487511‑3487360 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aggcgTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGGCCAGAGGGCAGTGGCTGTAACCGTCGAGGCTGTCACCGTCGAC > NC_002947/3487396‑3487542 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |