New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3487360 =	65 (1.290)	5 (0.100)	5/248	NT	8.5%	coding (651/1344 nt)	PP_3093	hypothetical protein
	?	NC_002947	3487396 =	45 (0.930)					coding (615/1344 nt)	PP_3093	hypothetical protein

GCGCTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGG  >  NC_002947/3487213‑3487499                                                                                                                                                    |                                                                                                                                              gtcgacggtgacagcctcgacggttacagccactgccctctggccaagctgacacgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccccgagaccattgccggcatcggcaaaCg                                                                                                                                              <  3:53870‑M1/2‑1 (MQ=255)   gcTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGcc                                                                                                                                            <  1:193786/149‑1 (MQ=255)   gcTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGAAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGcc                                                                                                                                            >  5:231231/1‑149 (MQ=255)    gacggtgacagcctcgacggttacagccactgccctctggccaagctgacacgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattgccggcatcggcaaaCGCCt                                                                                                                                           >  1:17323‑M1/145‑149 (MQ=255)    ctctGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCt                                                                                                                                           <  5:122462/149‑1 (MQ=255)         ggTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCACTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑g                                                                                                                                        <  2:311471/146‑1 (MQ=255)            gCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTg                                                                                                                                  >  6:49099/1‑149 (MQ=255)             cAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTg                                                                                                                                  <  5:49099/148‑1 (MQ=255)              aGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGc                                                                                                                                <  2:260217/149‑1 (MQ=255)              aGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGc                                                                                                                                <  5:269714/149‑1 (MQ=255)                gcgcGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑g                                                                                                                                        <  2:266908/139‑1 (MQ=255)                gcgcGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑g                                                                                                                                        >  1:266908/1‑139 (MQ=255)                   cgGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCa                                                                                                                           <  4:110182/149‑1 (MQ=255)                        gggCCAGTAGATGAGCCAGCTGAGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGgcg                                                                                                                      >  5:227954/1‑149 (MQ=255)                         ggCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGgcg                                                                                                                      <  7:47576/148‑1 (MQ=255)                          gCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGcc                                                                                                                    >  7:210106/1‑149 (MQ=255)                          gCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGcc                                                                                                                    >  8:89178/1‑149 (MQ=255)                           ccAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCg                                                                                                                   <  7:115904/149‑1 (MQ=255)                            cAGTAGATGAGCCAGCTGCGGGGTGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCTGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGa                                                                                                                  <  6:227954/149‑1 (MQ=255)                             aGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAg                                                                                                                 <  7:89178/149‑1 (MQ=255)                              gTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGc                                                                                                                <  1:175109/149‑1 (MQ=255)                                actgccctctggccaagctgacacgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattgccggcatcggcaaaCGCCT‑‑GCTCTTGGCCTGCAGGGCGCCGAGCAg                                                                                                              <  5:243151‑M1/32‑1 (MQ=255)                                actgccctctggccaagctgacacgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattgccggcatcggcaaaCGCCT‑‑GCTCTTGGCCTGCAGGGCGCCGAGCAg                                                                                                              >  6:243151‑M1/117‑148 (MQ=255)                                 gATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAgg                                                                                                             <  4:82041/149‑1 (MQ=255)                                   tGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGc                                                                                                            <  3:195339/148‑1 (MQ=255)                                     aGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGt                                                                                                          <  2:310756/148‑1 (MQ=255)                                     aGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGt                                                                                                          <  2:305819/148‑1 (MQ=255)                                      gCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGttt                                                                                                        <  8:10952/149‑1 (MQ=255)                                      gCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGttt                                                                                                        <  6:301000/149‑1 (MQ=255)                                       ccAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGc                                                                                                                                >  8:194110/1‑124 (MQ=255)                                       ccAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTCGc                                                                                                                                <  7:194110/124‑1 (MQ=255)                                           gccaagctgacacgcaacagcatgggcggtttcaaccttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattgccggcatcggcaaaCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGcc                                                                                                     >  1:33560‑M1/106‑147 (MQ=255)                                             gCGGGTGGGTACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATg                                                                                                 >  1:168352/1‑149 (MQ=255)                                              cGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATg                                                                                                 <  5:231593/148‑1 (MQ=255)                                               gggTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGcc                                                                                               >  6:4534/1‑149 (MQ=255)                                                ggTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTg                                                                                                       >  2:60312/1‑140 (MQ=255)                                                ggTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTg                                                                                                       <  1:60312/140‑1 (MQ=255)                                                 gTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCgg                                                                                             >  4:10333/1‑149 (MQ=255)                                                    ggCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCaa                                                                                          <  8:34388/149‑1 (MQ=255)                                                           ttGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGtctc                                                                                   <  5:4534/149‑1 (MQ=255)                                                               ccGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTgg                                                                               >  8:149146/1‑149 (MQ=255)                                                               ccGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTgg                                                                               <  8:210106/149‑1 (MQ=255)                                                                cGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGGACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGc                                                                              >  5:78958/1‑149 (MQ=255)                                                                         cagcCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGt                                                                     <  1:293969/149‑1 (MQ=255)                                                                           gcCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTg                                                                    >  2:67082/1‑148 (MQ=255)                                                                             accttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattgccggcatcggcaaaCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCa                                                                                                               >  1:159976‑M1/72‑103 (MQ=255)                                                                             accttgacccgcatttcgtccaccccaccttgcacctgggcagccacgagaccattgccggcatcggcaaaCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCa                                                                                                               <  2:159976‑M1/32‑1 (MQ=255)                                                                                     ggTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAggt‑ggggt                                                        <  7:149146/149‑1 (MQ=255)                                                                                           aTCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTCCCCAGCTGCAAGGT‑CGGGTGGACg                                                   >  4:179000/1‑148 (MQ=255)                                                                                             cGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGAGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGaaa                                                >  4:53870/1‑149 (MQ=255)                                                                                               cTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATg                                              >  5:68952/1‑149 (MQ=255)                                                                                                tGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGc                                             >  3:252580/1‑149 (MQ=255)                                                                                                tGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGc                                             >  6:308387/1‑149 (MQ=255)                                                                                                  gAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCgg                                           <  6:68952/149‑1 (MQ=255)                                                                                                     ccGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTTGGCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCAAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGt                                         >  1:84411/1‑149 (MQ=255)                                                                                                        aaCTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAg                                     >  5:58577/1‑149 (MQ=255)                                                                                                        aaCTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAg                                     >  6:126076/1‑149 (MQ=255)                                                                                                          cTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGt                                   <  5:308387/149‑1 (MQ=255)                                                                                                           tCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGtt                                  <  3:179000/149‑1 (MQ=255)                                                                                                               cGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGaaa                              <  6:78958/149‑1 (MQ=255)                                                                                                                    tGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGtctc                                                                                   <  3:100479/92‑1 (MQ=255)                                                                                                                    tGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGtctc                                                                                   >  4:100479/1‑92 (MQ=255)                                                                                                                      gTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCa                       >  2:160815/1‑149 (MQ=255)                                                                                                                          gcgcgcTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCt                   >  4:167670/1‑149 (MQ=255)                                                                                                                             cgcTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGtt                <  4:252580/149‑1 (MQ=255)                                                                                                                                 cgcgGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGa                                                     >  5:164666/1‑108 (MQ=255)                                                                                                                                 cgcgGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGa                                                     <  6:164666/108‑1 (MQ=255)                                                                                                                                  gcggcgCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGTGGGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGc              <  1:67082/147‑1 (MQ=255)                                                                                                                                   cggcgCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCgtgt          <  2:168352/149‑1 (MQ=255)                                                                                                                                       gccggccgGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGc      <  6:231231/149‑1 (MQ=255)                                                                                                                                           gccggAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGtt                <  7:143842/135‑1 (MQ=255)                                                                                                                                           gccggAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGtt                >  8:148053/1‑135 (MQ=255)                                                                                                                                           gccggAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGtt                >  8:143842/1‑135 (MQ=255)                                                                                                                                           gccggAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGtt                <  7:148053/135‑1 (MQ=255)                                                                                                                                           gccggAAAGCGCCTT‑GATCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTgg  >  2:261452/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                              GCGCTCTGGGTGCAGGCGCGGGTGGGCCAGTAGATGAGCCAGCTGCGGGTGGGCACGGTTGACCGTGTTCAGCAGCCAGAACAGGGTTACATCGCTGGAGCCGAACTCGGCGATCTGGTCGGCGCGCTCGCGGCGCCGGCCGGAAAGCGCCTT‑GCTCTTGGCCTGCAGGGCGCCGAGCAGGCGTTTGCCGATGCCGGCAATGGTCTCGTGGCTGCCCAGGTGCAAGGT‑GGGGTGGACGAAATGCGGGTCAAGGTTGAAACCGCCCATGCTGTTGCGTGTCAGCTTGG  >  NC_002947/3487213‑3487499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.