| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3568272 | 44 (0.870) | 3 (0.060) | 3/244 | NT | 6.3% | coding (829/1998 nt) | PP_3150 | hypothetical protein |
| ? | NC_002947 | = 3568302 | 48 (1.010) | coding (859/1998 nt) | PP_3150 | hypothetical protein | |||||
CTGGCCTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3568119‑3568272‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccaCTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGACCCGCG < NC_002947/3568302‑3568156 CTGGCCTTCAGTCAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCG > 8:184061/1‑149 CTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACC > 2:307999/1‑148 TTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACC > 2:80562/1‑147 AAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTA < 6:102245/149‑1 CTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGA < 1:207567/124‑1 CTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGA > 2:207567/1‑124 agctGCACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTT < 5:249856/145‑1 ACCACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGACCCG > 7:136795/1‑149 CACTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGACCCGCG > 7:173664/1‑149 CTGGCCTTGACTGAAGGCCAGTTGCGCGCGCTGCAGGCGCGGGTCAAGGACGCTGCCGCCTATACCGCGCTGACCTTCGGCCAACTGGCTGACGAGCTGCTCAACCGTGACCTCACCAGCAACGGCTGGCGATTGCGCGATCCGTACCGCACCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/3568119‑3568272‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcaccaCTTGCGCTTCCTGGGGGCGCCAGGACAGCTTGGTGCGGTACGGATCGCGCAATCGCCAGCCGTTGCTGGTGAGGTCACGGTTGAGCAGCTCGTCAGCCAGTTGGCCGAAGGTCAGCGCGGTATAGGCGGCAGCGTCCTTGACCCGCG < NC_002947/3568302‑3568156 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |