| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3762035 = | 61 (1.210) | 4 (0.080) | 4/248 | NT | 5.6% | coding (1383/2091 nt) | PP_3325 | ferric siderophore receptor |
| ? | NC_002947 | 3762100 = | 77 (1.590) | coding (1448/2091 nt) | PP_3325 | ferric siderophore receptor | |||||
ACTCCGGTCTCGTAACCCAAGCCCTTTTCAGGCTTGTACACCTGGCCCTGGGTGCCGATGGTGTTGGGTTTGAACGAAGTGGATGCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3762184‑3762035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCT > NC_002947/3762100‑3762190 ACTCCGGTCTCGTAACCCAAGCCCTTTTCAGGCTTGTACACCTGGCCCTGGGTGCCGATGGTGTTGGGTTTGAACGAAGTGGATGCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAAC > 6:10259/1‑149 CTCCGGTCTCGTAACCCAAGCCCTTTTCAGGCTTGTACACCTGGCCCTGGGTGCCGATGGTGTTGGGTTTGAACGAAGTGGATGCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAACG > 6:180013/1‑149 GATGGTGTTGGGTTTGAACGAAGTGGATGCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAAC < 1:86156/93‑1 GATGGTGTTGGGTTTGAACGAAGTGGATGCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAAC > 2:86156/1‑93 AAGTGGATGCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTAC < 1:209510/148‑1 AAGTGGATGCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTAC > 2:209510/1‑148 GCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCG > 5:238732/1‑147 GAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCT < 6:238732/149‑1 ACTCCGGTCTCGTAACCCAAGCCCTTTTCAGGCTTGTACACCTGGCCCTGGGTGCCGATGGTGTTGGGTTTGAACGAAGTGGATGCGTTGGCGAACACGCCGACTTGCGGGGTCAGTTGGTACAACACCCCGATGCGCGGTGTGGCAACG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3762184‑3762035‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caacgCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCT > NC_002947/3762100‑3762190 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |