New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 3762035 =61 (1.210)4 (0.080) 4/248 NT 5.6% coding (1383/2091 nt) PP_3325 ferric siderophore receptor
?NC_002947 3762100 = 77 (1.590)coding (1448/2091 nt) PP_3325 ferric siderophore receptor

GTTGCTGGGCGTACGCCTGGAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGACCATCGCCCTGTTCCATATCGA  >  NC_002947/3761954‑3762241
                                                                                                                                                  |                                                                                                                                             
gTTGCTGGGCGTACGCCTGGAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCAt                                                                                                                                             >  5:73348/1‑149 (MQ=255)
gTTGCTGGGCGTACGCCTGGAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCAt                                                                                                                                             >  5:280752/1‑149 (MQ=255)
cggtctcgtaacccaagcccttttcaggcttgtacacctggccctgggtgccgatggtgttgggtttgaacgaagtggatgCGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGc                                                                                                                                               >  5:238732‑M1/82‑147 (MQ=255)
     tGGGCGTACGCCTGGAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACt                                                                                                                                        >  1:107169/1‑149 (MQ=255)
     tGGGCGTACGCCTGGAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACt                                                                                                                                        >  7:285248/1‑149 (MQ=255)
       gtaacccaagcccttttcaggcttgtacacctggccctgggtgccgatggtgttgggtttgaacgaagtggatgCGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACtt                                                                                                                                       <  1:209510‑M1/74‑1 (MQ=255)
       gtaacccaagcccttttcaggcttgtacacctggccctgggtgccgatggtgttgggtttgaacgaagtggatgCGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACtt                                                                                                                                       >  2:209510‑M1/75‑148 (MQ=255)
         cGTACGCCTGGAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGt                                                                                                                                    <  7:251628/149‑1 (MQ=255)
          gTACGCCTGGAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCTGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGtt                                                                                                                                   <  3:216232/149‑1 (MQ=255)
                  ggAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACACCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAAccc                                                                                                                            >  7:286316/1‑148 (MQ=255)
                        cTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCa                                                                                                                     <  7:195051/149‑1 (MQ=255)
                         ttCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCaaa                                                                                                                               >  6:261440/1‑138 (MQ=255)
                         ttCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCaaa                                                                                                                               <  5:261440/138‑1 (MQ=255)
                         ttCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCAt                                                                                                                    >  2:261912/1‑149 (MQ=255)
                         ttCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCAt                                                                                                                    >  6:145932/1‑149 (MQ=255)
                                 gACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCAcc                                                                                                             >  5:302965/1‑148 (MQ=255)
                                   ccTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCGAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAg                                                                                                          <  6:148668/149‑1 (MQ=255)
                                   ccTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGAATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAg                                                                                                          <  7:258768/149‑1 (MQ=255)
                                    cTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCgg                                                                                                                 <  8:251113/141‑1 (MQ=255)
                                    cTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCgg                                                                                                                 >  7:251113/1‑141 (MQ=255)
                                     tCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATc                                                                                                                                            >  8:111779/1‑113 (MQ=255)
                                     tCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAggg                                                                                                        >  5:23147/1‑149 (MQ=255)
                                         aGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAg                                                                                                    <  5:145932/149‑1 (MQ=255)
                                         aGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAg                                                                                                    <  6:62442/149‑1 (MQ=255)
                                             ccGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGgtg                                                                                                 >  5:257075/1‑148 (MQ=255)
                                                caccacGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTc                                                                                                                                      <  8:232281/108‑1 (MQ=255)
                                                caccacGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTc                                                                                                                                      >  7:232281/1‑108 (MQ=255)
                                                   cacGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGc                                                                                          <  3:203221/149‑1 (MQ=255)
                                                   cacGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGc                                                                                          >  7:158420/1‑149 (MQ=255)
                                                     cGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCgg                                                                                                                 <  6:19860/124‑1 (MQ=255)
                                                     cGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCgg                                                                                                                 >  5:19860/1‑124 (MQ=255)
                                                       ggTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGa                                                                                      <  6:280752/149‑1 (MQ=255)
                                                        gTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGa                                                                                      >  4:235389/1‑148 (MQ=255)
                                                        gTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGAACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCAGCACCCAGGGCCAGGTGTACAAGCCTGa                                                                                      >  1:245457/1‑148 (MQ=255)
                                                        gTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACAGCGCATCGGGGTGTTGTACCAACTGACACCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACAATCGGCACCCAGGGCCAGGTGTACAAGCCTGa                                                                                      >  4:125338/1‑148 (MQ=255)
                                                         tctcAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCg                                                                                                                  <  5:277303/119‑1 (MQ=255)
                                                         tctcAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCg                                                                                                                  >  6:277303/1‑119 (MQ=255)
                                                             aGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAggg                                                                                >  5:10259/1‑149 (MQ=255)
                                                             aGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAggg                                                                                >  4:76481/1‑149 (MQ=255)
                                                                aaCAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCtt                                                                             <  6:302965/149‑1 (MQ=255)
                                                                 aCAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTg                                                                            <  8:285248/149‑1 (MQ=255)
                                                                  cAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTgg                                                                           <  8:286316/149‑1 (MQ=255)
                                                                      cAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTa                                                                       <  8:108582/149‑1 (MQ=255)
                                                                       aGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTAc                                                                      <  6:73348/149‑1 (MQ=255)
                                                                        aagtggatgcgttggcgaacacgccgacttgcggggtcagttggtacaacaccccgatgcgcggtgtggcaacgCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTAc                                                                      <  1:209510‑M2/74‑1 (MQ=255)
                                                                        aagtggatgcgttggcgaacacgccgacttgcggggtcagttggtacaacaccccgatgcgcggtgtggcaacgCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTAc                                                                      >  2:209510‑M2/75‑148 (MQ=255)
                                                                         gAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAggg                                                                                                        >  3:273721/1‑113 (MQ=255)
                                                                         gAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAggg                                                                                                        <  4:273721/113‑1 (MQ=255)
                                                                         gAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACga                                                                    <  3:76481/149‑1 (MQ=255)
                                                                            aaGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGtt                                                                        <  7:251547/142‑1 (MQ=255)
                                                                            aaGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGtt                                                                        >  8:251547/1‑142 (MQ=255)
                                                                              ggACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCg                                                               >  5:180013/1‑149 (MQ=255)
                                                                              ggACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCg                                                               <  6:23147/149‑1 (MQ=255)
                                                                               gACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCACCGCAGCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCATGGGTTACGAGACCg                                                               >  3:201650/1‑148 (MQ=255)
                                                                               gACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACaa                                                                                            <  5:22918/119‑1 (MQ=255)
                                                                               gACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACaa                                                                                            >  6:22918/1‑119 (MQ=255)
                                                                                gcgttggcgaacacgccgacttgcggggtcagttggtacaacaccccgatgcgcggtgtggcaacgCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCg                                                               >  5:238732‑M2/67‑147 (MQ=255)
                                                                                 CGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAg                                                            >  6:180013‑M1/1‑149 (MQ=255)
                                                                                  GTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATc                                                                                                                   >  2:86156‑M1/1‑93 (MQ=255)
                                                                                  GTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATc                                                                                                                   <  1:86156‑M1/93‑1 (MQ=255)
                                                                                  GTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGt                                                           >  6:10259‑M1/1‑149 (MQ=255)
                                                                                       cacaCCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACgaga                                                                  <  6:5879/137‑1 (MQ=255)
                                                                                       cacaCCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACgaga                                                                  >  5:5879/1‑137 (MQ=255)
                                                                                        gaacacgccgacttgcggggtcagttggtacaacaccccgatgcgcggtgtggcaacgCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCt                                                     <  6:238732‑M2/91‑1 (MQ=255)
                                                                                            cgcgCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGAc                                                 <  8:158420/149‑1 (MQ=255)
                                                                                              cgcATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACACAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCt                                               >  2:130034/1‑149 (MQ=255)
                                                                                                  tCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTtctc                                           >  4:250887/1‑149 (MQ=255)
                                                                                                  tCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTtctc                                           >  6:318336/1‑149 (MQ=255)
                                                                                                  tCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGAATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTtctc                                           <  3:250887/149‑1 (MQ=255)
                                                                                                      ggTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACa                                       <  8:192557/149‑1 (MQ=255)
                                                                                                       gtgtTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTgg                                                                           >  1:248081/1‑112 (MQ=255)
                                                                                                       gtgtTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTgg                                                                           <  2:248081/112‑1 (MQ=255)
                                                                                                        tgttgtACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAgc                                     >  5:126261/1‑149 (MQ=255)
                                                                                                            gtACCAACTGACCCCGCAAGTCGGAGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAgccgcc                                 >  7:199340/1‑149 (MQ=255)
                                                                                                             tACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCt                                <  6:257075/149‑1 (MQ=255)
                                                                                                               ccAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGCCCTTCTCGACAGCCGCCTgg                              >  7:165977/1‑149 (MQ=255)
                                                                                                               ccAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTgg                              >  5:331010/1‑149 (MQ=255)
                                                                                                               ccAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTgg                              >  2:182520/1‑149 (MQ=255)
                                                                                                                cAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAg                                                                                  <  3:24848/96‑1 (MQ=255)
                                                                                                                cAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAg                                                                                  >  4:24848/1‑96 (MQ=255)
                                                                                                                 aaCTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGa                                                             <  2:296643/116‑1 (MQ=255)
                                                                                                                 aaCTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGa                                                             >  1:296643/1‑116 (MQ=255)
                                                                                                                      aCCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGa                        <  3:235389/148‑1 (MQ=255)
                                                                                                                        cccGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGaaaa                                                                                   <  8:211677/87‑1 (MQ=255)
                                                                                                                        cccGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCg                                                               >  8:218598/1‑107 (MQ=255)
                                                                                                                        cccGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCg                                                               <  7:218598/107‑1 (MQ=255)
                                                                                                                         ccGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGACCAt                    >  2:24308/1‑149 (MQ=255)
                                                                                                                          cGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGACCATc                   >  4:311677/1‑149 (MQ=255)
                                                                                                                           gCAAGTCGGCGGGTTCTCCAACGCATCCACTTCGTTCAAACCCACCTCCATCGGCACCCAGGGCCAGGTTGACAAGCCTGAAATGGGCTTGGGTTACGAGACCTGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGACCATCg                  <  4:201650/149‑1 (MQ=255)
                                                                                                                                  ggCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGACCATCGCCCTGtt           <  1:24308/149‑1 (MQ=255)
                                                                                                                                    cGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCAGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGACCATCGCCCTGTTcc         <  2:245457/149‑1 (MQ=255)
                                                                                                                                           gCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGACCATCGCCCTGTTCCATATCGa  <  6:126261/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                             
GTTGCTGGGCGTACGCCTGGAGCGCTTCGAGCAGACCTCGCAGAACCGCACCACGGGTCTCAGCAACAGCCAGGAAAAGGACGTTGCCACACCGCGCATCGGGGTGTTGTACCAACTGACCCCGCAAGTCGGCGTGTTCGCCAACGCATCCACTTCGTTCAAACCCAACACCATCGGCACCCAGGGCCAGGTGTACAAGCCTGAAAAGGGCTTGGGTTACGAGACCGGAGTCAAGCTCGACCTTCTCGACAGCCGCCTGGGCGCGACCATCGCCCTGTTCCATATCGA  >  NC_002947/3761954‑3762241

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.