| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3762377 = | 46 (0.910) | 5 (0.100) | 5/252 | NT | 10.1% | coding (1725/2091 nt) | PP_3325 | ferric siderophore receptor |
| ? | NC_002947 | 3762439 = | 44 (0.890) | coding (1787/2091 nt) | PP_3325 | ferric siderophore receptor | |||||
CGTAGTTCACCGCTGCGCCCACATCCGAGCCGCGCAGGGCCCCGTCCT‑GGAATTCGTACACGCCCATCAGGCTGCCGCTGTTACGGGCGATGCCGAGCAAGTCGCTGCCTTTGGGCAGGGCTGCGTCGCCTTTGGTGACCTCGGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3762525‑3762377‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTCGGCGAACGCTCCGGCCAGGCCGGCAGCGACTTCACCCT > NC_002947/3762439‑3762565 CGTAGTTCACCGCTGCGCCCACATCCGAGCCGCGCAGGGCCCCGTCCTGGGAATTCGTACACGCCCATCAGGCTGCCGCTGTTACGGGCGATGCCGAGCAAGTCGCTGCCTTTGGGCAGGGCTGCGTCGCCTTTGGTGCCCTCGGCGTC > 1:75621/1‑149 CGGGCGATGCCGAGCAAGTCGCTGCCTTTGGGCAGGGCTGCGTCGCCTTTGGTGACCTCGGCGTCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAAC > 3:176778/1‑149 GATGCCGAGCAAGTCGCTGCCTTTGGGCAGGGCTGCGTCGCCTTTGGTGACCTCGGCGTCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGT > 6:67552/1‑149 ATGCCGAGCAAGTCGCTGCCTTTGGGCAGGGCTGCGTCGCCTTTGGTGACCTCGGCGTCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTC > 1:257238/1‑149 ATGCCGAGCAAGTCGCTGCCTTTGGGCAGGGCTGCGTCGCCTTTGGTGACCTCGGCGTCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTC < 5:67552/149‑1 GCAAGTCGCTGCCTTTGGGCAGGGCTGCGTCGCCTTTGGTGACCTCGGCGTCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTCGGCGAAC < 2:257238/149‑1 GCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTCGGCGAACGCTCCGGCCAGGCCGGCAGCGACTTCACCCT > 3:246191/1‑128 GCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTCGGCGAACGCTCCGGCCAGGCCGGCAGCGACTTCACCCT < 4:246191/128‑1 GCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTCGGCGAACGCTCCGGCCAGGCCGGCAGCGACTTCACC > 3:21032/1‑126 GCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTCGGCGAACGCTCCGGCCAGGCCGGCAGCGACTTCACC < 4:21032/126‑1 CGTAGTTCACCGCTGCGCCCACATCCGAGCCGCGCAGGGCCCCGTCCT‑GGAATTCGTACACGCCCATCAGGCTGCCGCTGTTACGGGCGATGCCGAGCAAGTCGCTGCCTTTGGGCAGGGCTGCGTCGCCTTTGGTGACCTCGGCGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3762525‑3762377‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAACTACGTCGGCGAACGCTCCGGCCAGGCCGGCAGCGACTTCACCCT > NC_002947/3762439‑3762565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |