New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3762377 =	46 (0.910)	5 (0.100)	5/252	NT	10.1%	coding (1725/2091 nt)	PP_3325	ferric siderophore receptor
	?	NC_002947	3762439 =	44 (0.890)					coding (1787/2091 nt)	PP_3325	ferric siderophore receptor

TATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAA  >  NC_002947/3762236‑3762520                                                                                                                                              |                                                                                                                                                tatCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGcc                                                                                                                                           >  7:90864/1‑148 (MQ=255)    cGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAgg                                                                                                                                       >  5:114080/1‑149 (MQ=255)              aaCGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGTCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTGGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAgg                                                                                                                             <  6:253493/149‑1 (MQ=255)              aaCGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAgg                                                                                                                             <  1:86226/149‑1 (MQ=255)               agggtgaagtcgctgccggcctggccggagcgttcgccgacgtagttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggc                                                                                                                                                 >  3:246191‑M1/128‑128 (MQ=255)               agggtgaagtcgctgccggcctggccggagcgttcgccgacgtagttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggc                                                                                                                                                 <  4:246191‑M1/1‑1 (MQ=255)                 ggtgaagtcgctgccggcctggccggagcgttcgccgacgtagttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggc                                                                                                                                                 >  3:21032‑M1/126‑126 (MQ=255)                 ggtgaagtcgctgccggcctggccggagcgttcgccgacgtagttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggc                                                                                                                                                 <  4:21032‑M1/1‑1 (MQ=255)                   catcaCCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACg                                                                                                                        >  4:301835/1‑149 (MQ=255)                     tcaCCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACg                                                                                                                        >  4:106595/1‑147 (MQ=255)                       accaccGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACACCGAGGTCACCAAAGGCGACGCAGc                                                                                                                    >  2:15245/1‑149 (MQ=255)                        ccaccGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGcc                                                                                                                   >  3:38649/1‑149 (MQ=255)                         caccGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGccc                                                                                                                  >  3:153119/1‑149 (MQ=255)                            cGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTAAATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGc                                                                                                               >  2:245415/1‑149 (MQ=255)                             gACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCTCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGcc                                                                                                              >  5:11359/1‑149 (MQ=255)                              aCGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGcc                                                                                                              >  4:6057/1‑148 (MQ=255)                              aCGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGcc                                                                                                              >  8:243883/1‑148 (MQ=255)                                        cGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCg                                                                                                   <  6:114080/149‑1 (MQ=255)                                              gttcgccgacgtagttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGc                                                                                             <  2:257238‑M1/53‑1 (MQ=255)                                              cGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGc                                                                                             >  5:198531/1‑149 (MQ=255)                                                tGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTc                                                                                           <  4:38649/149‑1 (MQ=255)                                                    ggcgggcgAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCa                                                                                       >  1:126044/1‑149 (MQ=255)                                                     gacgtagttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCAt                                                                                      <  5:67552‑M1/60‑1 (MQ=255)                                                     gacgtagttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCAt                                                                                      >  1:257238‑M1/90‑149 (MQ=255)                                                      acgtagttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATc                                                                                     >  6:67552‑M1/89‑149 (MQ=255)                                                       gggcgAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCTAGGTCACCAAAgg                                                                                                                             <  6:34893/108‑1 (MQ=255)                                                       gggcgAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAgg                                                                                                                             >  5:34893/1‑108 (MQ=255)                                                          cgAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGccc                                                                                 <  8:90864/149‑1 (MQ=255)                                                           gttcaccgctgcgcccacatccgagccgcgcagggccccgtcctggaattcgtacacgcccatcaggctgccgctgttacgggCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCg                                                                                >  3:176778‑M1/84‑149 (MQ=255)                                                               cgcgcAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTaa                                                                             >  8:139373/1‑148 (MQ=255)                                                                gcgcAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCg                                                                                    <  1:98381/140‑1 (MQ=255)                                                                gcgcAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCg                                                                                    >  2:98381/1‑140 (MQ=255)                                                                 cgcAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCTCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAg                                                                          <  6:11359/149‑1 (MQ=255)                                                                      ccAAAGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGt                                                                               >  6:246676/1‑139 (MQ=255)                                                                      ccAAAGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGt                                                                               <  5:246676/139‑1 (MQ=255)                                                                         aGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAg                                                                                                                              >  2:27683/1‑89 (MQ=255)                                                                         aGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCAACGCCTACATCGACGCCGAGGTCACCAAAg                                                                                                                              <  1:27683/89‑1 (MQ=255)                                                                            ccTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGa                                                               >  7:74725/1‑149 (MQ=255)                                                                             cTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCTGCATCGCCCGTAACAGCGGCAGCCTGAt                                                              <  1:15245/149‑1 (MQ=255)                                                                                gACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATgg                                                            <  3:301835/148‑1 (MQ=255)                                                                                 aCCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGc                                                          <  2:65636/149‑1 (MQ=255)                                                                                   cTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCgt                                                        >  6:132549/1‑149 (MQ=255)                                                                                     gCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGATGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCgtg                                                       <  2:229165/148‑1 (MQ=255)                                                                                      cAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCgtg                                                       <  7:243883/147‑1 (MQ=255)                                                                                       aGTTCAGCGGCCAACTGACTGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTAc                                                    <  2:260926/149‑1 (MQ=255)                                                                                       aGTTCAGCGGCCAACTGACCGACGCCTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCgtgt                                                      >  5:283056/1‑147 (MQ=255)                                                                                         ttCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACg                                                   >  5:230358/1‑148 (MQ=255)                                                                                                        aCCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGAc                                                                                                 <  7:289028/87‑1 (MQ=255)                                                                                                                   gCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCt                        >  2:75621/1‑149 (MQ=255)                                                                                                                     gAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCg                      >  5:63239/1‑149 (MQ=255)                                                                                                                         gATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGAtg                  >  5:18536/1‑149 (MQ=255)                                                                                                                           tCGGCGCCTACGCCTACATCGACGCGGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCgccccgg                >  2:173535/1‑143 (MQ=255)                                                                                                                           tCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGAtgtg                <  4:153119/149‑1 (MQ=255)                                                                                                                           tCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGAtgtg                <  4:293460/149‑1 (MQ=255)                                                                                                                             ggCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTggg              <  5:179822/149‑1 (MQ=255)                                                                                                                                           cATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGaa  <  7:139373/147‑1 (MQ=255)                                                                                                                                           cATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGaa  <  6:230358/147‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                TATCGACAAGGAGAACGTCATCACCACCGACGCCCTTGGCGAGAGCGTGGCGGCGGGCGAAGCGCGCAGCCAAGGCCTGGACCTGCAGTTCAGCGGCCAACTGACCGACGCGTTGCGAGTGATCGGCGCCTACGCCTACATCGACGCCGAGGTCACCAAAGGCGACGCAGCCCTGCCCAAAGGCAGCGACTTGCTCGGCATCGCCCGTAACAGCGGCAGCCTGATGGGCGTGTACGAATTCCAGGACGGGGCCCTGCGCGGCTCGGATGTGGGCGCAGCGGTGAA  >  NC_002947/3762236‑3762520

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.