New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3859566 =	44 (0.870)	5 (0.110)	5/242	NT	10.6%	coding (400/753 nt)	cobM	precorrin‑4 C(11)‑methyltransferase
	?	NC_002947	3859608 =	43 (0.910)					coding (442/753 nt)	cobM	precorrin‑4 C(11)‑methyltransferase

CCGGGCAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3859719‑3859566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggtgagCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCACCTGTCGCGCATTGTCGCTGAGTTGATGCCGCACTACGGCGCGCACTGCCCGGTTGCGGTGGTGCATCGGGCCA  >  NC_002947/3859608‑3859740                                                                                                                                                                                                                                                                                                 CCGGGCAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGG                                                                                                                                            <  4:119070/149‑1  CGGGCAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGG                                                                                                                                           <  3:231031/149‑1     GCAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGA                                                                                                                                        <  2:114348/149‑1     GCAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGA                                                                                                                                        <  4:275857/149‑1     GCAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGA                                                                                                                                        <  6:246619/149‑1     GCAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGA                                                                                                                                        <  7:33473/149‑1      CAGTGCGCGCCGTAGTGCGGCATCACCTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGAG                                                                                                                                       <  5:331555/149‑1      CAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGAG                                                                                                                                       <  7:21234/149‑1                                                                                                        ACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGAGCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCACCTGTCGCGCATTGTCGCTGAGTT                                                    >  3:139353/1‑134                                                                                                        ACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGAGCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCACCTGTCGCGCATTGTCGCTGAGTT                                                    <  4:139353/134‑1                                                                                                               TGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGAGCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCACCTGTCGCGCATTGTCGCTGAGTTGATGCCGCACTACGGCGCGCAC                              >  5:206690/1‑149                                                                                                                 CTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGAGCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCACCTGTCGCGCATTGTCGCTGAGTTGATGCCGCACTACGGCGCGCACTG                            >  5:294415/1‑149                                                                                                                                            GCCATAGCGGGTGAGCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCACCTGTCGCGCATTGTCGCTGAGTTGATGCCGCACTACGGCGCGCACTGCCCGGTTGCGGTGGTGCATCGGGCCA  <  6:206690/148‑1                                                                                                                                                          GCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCAC                                                                           >  1:21171/1‑61                                                                                                                                                          GCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCAC                                                                           <  2:21171/61‑1                                                                                                                                                                                                                                                                                                 CCGGGCAGTGCGCGCCGTAGTGCGGCATCAACTCAGCGACAATGCGCGACAGGTGCTTGACCCCCAGATGAATTGCCAGGGTGCTGCCATGGCGCGCCAGGTCACCCAACTGCTCACCCGGCGGCATGGGCGAGCTGTCGCCATAGCGGGTGAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3859719‑3859566 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgggtgagCAGTTGGGTGACCTGGCGCGCCATGGCAGCACCCTGGCAATTCATCTGGGGGTCAAGCACCTGTCGCGCATTGTCGCTGAGTTGATGCCGCACTACGGCGCGCACTGCCCGGTTGCGGTGGTGCATCGGGCCA  >  NC_002947/3859608‑3859740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.