New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4000753 =	50 (0.990)	4 (0.080)	4/242	NT	8.1%	coding (435/1365 nt)	dmoA‑II	dimethyl‑sulfide monooxygenase
	?	NC_002947	4000806 =	44 (0.930)					coding (488/1365 nt)	dmoA‑II	dimethyl‑sulfide monooxygenase

GTACCCGCGAGGGTTCGATATAGCGCCCGCTTTCACGCTCCAGCAGCACGGCGTCGTCGTCCCAGCTTTTCTCCCACAGCTTGTACAGCACCTGCAGGTATTCCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCCGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4000907‑4000753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaggAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATATCGAACCCTCGCGGGTACACCCGATCAACCATGTGGGCGAGCACTTCCAGGTGCCCGGCAT  >  NC_002947/4000806‑4000950                                                                                                                                                                                                                                                                                                              GTACCCGCGAGGGTTCGATATAGCGCCCGCTTTCACGCTCCAGCAGCACGGCGTCGTCGTCCCAGCTTTTCTCCCACAGCTTGTACAGCACCTGCAGGTATTCCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGG                                                                                                                                                         >  6:116655/1‑149                           CCGCTTTCACGCTCCAGCAGCACGGCGTCGTCGTCCCAGCTTTTCTCCCACAGCTTGTACAGCACCTGCAGGTATTCCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCCGAG                                                                                                                                                    >  6:118422/1‑128                           CCGCTTTCACGCTCCAGCAGCACGGCGTCGGCGTCCCAGCTTTTCTCCCACAGCTTGTACAGCACCTGCAGGTATTCCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCCGAG                                                                                                                                                    <  5:118422/128‑1                                   ACGCTCCAGCAGCACGGCGTCGTCGTCCCAGCTTTTCTCCCACAGCTTGTACAGCACCTGCAGGTATTCCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCC                                                                                                                                                       <  1:146761/117‑1                                   ACGCTCCAGCAGCACGGCGTCGTCGTCCCAGCTTTTCTCCCACAGCTTGTACAGCACCTGCAGGTATTCCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCC                                                                                                                                                       >  2:146761/1‑117                                                                                                       CCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCCGAGGAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGAC                                                                                                       >  3:53196/1‑97                                                                                                       CCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCCGAGGAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGAC                                                                                                       <  4:53196/97‑1                                                                                                             CCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCCGAGGAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATAT                                                              >  7:64261/1‑132                                                                                                             CCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCCGAGGAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATAT                                                              <  8:64261/132‑1                                                                                                                                                    GGCCGAGGAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATATCGAACCCTCGCGGGTACACCCGATCAACCATGTGGGCGAGCACTTCCAGGTGCCCG      >  2:40628/1‑149                                                                                                                                                      CCGAGGAAAACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATATCGAACCCTCGCGGGTACACCCGATCAACCATGTGGGCGAGCACTTCCAGGTGCCCGG     >  6:281525/1‑148                                                                                                                                                       CGAGGAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATATCGAACCCTCGCGGGTACACCCGATCAACCATGTGGGCGAGCACTTCCAGGTGCCCGGCA   >  6:71238/1‑149                                                                                                                                                        GAGGAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATATCGAACCCTCGCGGGTACACCCGATCAACCATGTGGGCGAGCACTTCCAGGTGCCCGGCAT  <  6:201248/149‑1                                                                                                                                                           GAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATATCGAACCCTCGCGG                                                 <  1:270222/99‑1                                                                                                                                                           GAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATATCGAACCCTCGCGG                                                 >  2:270222/1‑99                                                                                                                                                                                                                                                                                                              GTACCCGCGAGGGTTCGATATAGCGCCCGCTTTCACGCTCCAGCAGCACGGCGTCGTCGTCCCAGCTTTTCTCCCACAGCTTGTACAGCACCTGCAGGTATTCCTCGGCCAGGTCGTAGCGTTGGTCGTGGCCCCGTTGACGCGCCAGGCCGAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4000907‑4000753 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggccgaggAATACCTGCAGGTGCTGTACAAGCTGTGGGAGAAAAGCTGGGACGACGACGCCGTGCTGCTGGAGCGTGAAAGCGGGCGCTATATCGAACCCTCGCGGGTACACCCGATCAACCATGTGGGCGAGCACTTCCAGGTGCCCGGCAT  >  NC_002947/4000806‑4000950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.