New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4093994	54 (1.070)	3 (0.060)	3/242	NT	5.5%	coding (991/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase
	?	NC_002947	= 4094016	53 (1.120)					coding (1013/1581 nt)	PP_3602	2,5‑dioxovalerate dehydrogenase

ACGTGGCGAGGCCATTGCCCGCGAGTTGGCGGGGTCCGTGTGCATGGGTGCCGGGCAGTTCTGCACCAACCCTGGGCTGGTGATTGGCTTGCAGTCGCCACAGTACAGCCAACTGCTCGCCGACCTTGGCCAGTACCTGGACCAGCAAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4093843‑4093994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagccgCCAGCATTGAGCATGGTTTGCCCGGCTTGCTGGTCCAGGTACTGGCCAAGGTCGGCGAGCAGTTGGCTGTACTGTGGCGACTGCAAGCCAATCACCAGCCCAGGGTTGGTGCAGAACTGCCCGGCACCCATGCACACGGACCCCGC  <  NC_002947/4094016‑4093871                                                                                                                                                                                                                                                                                                            ACGTGGCGAGGCCATTGCCCGCGAGTTGGCGGGGTCCGTGTGCATGGGTGCCGGGCAGTTCTGCACCAACCCTGGGCTGGTGATTGGCTTGCAGTCGCCACAGTACAGCCAACTGCTCGCCGACCTTGGCCAGTACCTGGACCAGCAAG                                                                                                                                                       >  6:109164/1‑149    TGGCGAGGCCATTGCCCGCGAGTTGGCGGGGTCCGTGTGCATGGGTGCCGGGCAGTTCTGCACCAACCCTGGGCTGGTGATTGGCTTGCAGTCGCCACAGTACAGCCAACTGCTCGCCGACCTTGGCCAGTACCTGGACCAGCAAGCCG                                                                                                                                                    >  2:199769/1‑149                                   TCCGTGTGCATGGGTGCCGGGCAGTTCTGCACCAACCCTGGGCTGGTGATTGGCTTGCAGTCGCCACAGTACAGCCAACTGCTCGCCGACCTTGGCCAGTACCTGGACCAGCAAGCCGCCAGCATTGAGCATGGTTTGCCCGGCTTGCT                                                                                                                     <  1:199769/149‑1                                      GTGTGCATGGGTGCCGGGCAGTTCTGCACCAACCCTGGGCTGGTGATTGGCTTGCAGTCGCCACAGTACAGCCAACTGCTCGCCGACCTTGGCCAGTACCTGGACCAGCAAGCCGCCAGCATTGAGCATGGTTTGCCCGGCTTG                                                                                                                       >  3:106322/1‑144                                      GTGTGCATGGGTGCCGGGCAGTTCTGCACCAACCCTGGGCTGGTGATTGGCTTGCAGTCGCCACAGTACAGCCAACTGCTCGCCGACCTTGGCCAGTACCTGGACCAGCAAGCCGCCAGCATTGAGCATGGTTTGCCCGGCTTG                                                                                                                       <  4:106322/144‑1                                                                                                                                                  CAAGCCGCCAGCATTGAGCATGGTTTGCCCGGCTTGCTGGTCCAGGTACTGGCCAAGGTCGGCGAGCAGTTGGCTGTACTGTGGCGACTGCAAGCCAATCACCAGCCCAGGGTTGGTGCAGAACTGCCCGGCACCCATGCACACGGACC      >  1:71219/1‑149                                                                                                                                                       CGCCAGCATTGAGCATGGTTTGCCCGGCTTGCTGGTCCAGGTACTGGCCAAGGTCGGCGAGCAGTTGGCTGTACTGTGGCGACTGCAAGCCAATCACCAGCCCAGGGTTGGTGCAGAACTGCCCGGCACCCATGCACACGGACCCCGC  >  5:131353/1‑148                                                                                                                                                                                                                                                                                                            ACGTGGCGAGGCCATTGCCCGCGAGTTGGCGGGGTCCGTGTGCATGGGTGCCGGGCAGTTCTGCACCAACCCTGGGCTGGTGATTGGCTTGCAGTCGCCACAGTACAGCCAACTGCTCGCCGACCTTGGCCAGTACCTGGACCAGCAAGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4093843‑4093994 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcaagccgCCAGCATTGAGCATGGTTTGCCCGGCTTGCTGGTCCAGGTACTGGCCAAGGTCGGCGAGCAGTTGGCTGTACTGTGGCGACTGCAAGCCAATCACCAGCCCAGGGTTGGTGCAGAACTGCCCGGCACCCATGCACACGGACCCCGC  <  NC_002947/4094016‑4093871

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.