| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4132905 = | 57 (1.130) | 4 (0.080) | 4/246 | NT | 6.9% | coding (256/1206 nt) | PP_3636 | sulfonate ABC transporter substrate‑binding protein |
| ? | NC_002947 | 4132934 = | 54 (1.120) | coding (227/1206 nt) | PP_3636 | sulfonate ABC transporter substrate‑binding protein | |||||
GCGCGTGCCGCTGCCGAGCCGGACGCGCCGGTGCGCATCGGCTACCTGCCGATCACCGATGCCACGCCGCTGCTGGTGGCACATAACAACGGCCTGTTCGAGGCCGAAGGCATCAAGGCCGAGCGCCCGGTGCTGCTGCGCAGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4133055‑4132905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcTCGGCCTTGATGCCTTCGGCCTCGAACAGGCCGTTGTTATGTGCCACCAGCAGCGGCGTGGCATCGGTGATCGGCAGGTAGCCGATGCGCACCGGCGCGTCCGGCTCGGCAGCGGCACGCGCCTGCAAGCTCGACAGCAACGGCAA > NC_002947/4132934‑4133079 GCGCGTGCCGCTGCCGAGCCGGACGCGCCGGTGCGCATCGGCTACCTGCCGATCCCCGCTGCCACGCCGCTGCTGGTGGCACATAACAACGGCCTGTTCGAGGCCGAAGGCATCAAGGCCGAGCGCCCGGTGCTGCTGCGCAGCTGGGC > 7:257114/1‑149GCGCGTGCCGCTGCCGAGCCGGACGCGCCGGTGCGCATCGGCTACCTGCCGATCACCGATGCCACGCCGCTGCTGGTGGCACATAACAACGGCCTGTTCGAGGCCGAAGGCATCAAGGCCGAGCGCCCGGTGCTGCTGCGCAGCTGGGC > 6:108310/1‑149 CGAGCGCCCGGTGCTGCTGCGCAGCTGGGCGCTCGGCCTTGATGCCTTCGGCCTCGAACAGGCCGTTGTTATGTGCCACCAGCAGCGGCGTGGCATCGGTGATCGGCAGGTAGCCGATGCG < 7:177234/121‑1 CGAGCGCCCGGTGCTGCTGCGCAGCTGGGCGCTCGGCCTTGATGCCTTCGGCCTCGAACAGGCCGTTGTTATGTGCCACCAGCAGCGGCGTGGCATCGGTGATCGGCAGGTAGCCGATGCG > 8:177234/1‑121 CCGGTGCTGCTGCGCAGCTGGGCGCTCGGCCTTGATGCCTTCGGCCTCGAACAGGCCGTTGTTATGTGCCACCAGCAGCGGCGT < 5:15257/84‑1 CCGGTGCTGCTGCGCAGCTGGGCGCTCGGCCTTGATGCCTTCGGCCTCGAACAGGCCGTTGTTATGTGCCACCAGCAGCGGCGT > 6:15257/1‑84 CGCTCGGCCTTGATGCCTTCGGCCTCGAACAGGCCGTTGTTATGTGCCACCAGCAGCGGCGTGGCATCGGTGATCGGCAGGTAGCCGATGCGCACCGGCGCGTCCGGCTCGGCAGCGGCACGCGCCTGCAAGCTCGACAGCAACGGCAA < 2:61134/149‑1 CGCTCGGCCTTGATGCCTTCGGCCTCGAACAGGCCGTTGTTATGTGCCACCAGCAGCGGCGTGGCATCGGTGATCGGCAGGTAGCCGATGCGCACCGGCGCGTCCGGCTCGGCAGCGGCACGCGCCTGCAAGCTCGACAGCAACGGCAA < 5:238821/149‑1 GCGCGTGCCGCTGCCGAGCCGGACGCGCCGGTGCGCATCGGCTACCTGCCGATCACCGATGCCACGCCGCTGCTGGTGGCACATAACAACGGCCTGTTCGAGGCCGAAGGCATCAAGGCCGAGCGCCCGGTGCTGCTGCGCAGCTGGGCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4133055‑4132905‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcgcTCGGCCTTGATGCCTTCGGCCTCGAACAGGCCGTTGTTATGTGCCACCAGCAGCGGCGTGGCATCGGTGATCGGCAGGTAGCCGATGCGCACCGGCGCGTCCGGCTCGGCAGCGGCACGCGCCTGCAAGCTCGACAGCAACGGCAA > NC_002947/4132934‑4133079 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |