| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4184845 = | 55 (1.090) | 3 (0.060) | 3/242 | NT | 6.3% | coding (623/1659 nt) | PP_3681 | putative Helicase |
| ? | NC_002947 | 4184885 = | 38 (0.800) | coding (663/1659 nt) | PP_3681 | putative Helicase | |||||
TAGCAGATTGGACTTCGATCTGAAATTTGCGTACAGGTGGAGGGGTAGGGCATCGAAGTCAGTCGCATACGTCTTGAAGATGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4184930‑4184845‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgccctACCCCTCCACCTGTACGCAAATTTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTGAAATTGACCCCTCAGCAGTGACGCCAGCAGAACTGATCTCGGGTGATGAGGGAGAGGTCTTGGCAGTTCATTTC > NC_002947/4184885‑4185029 TAGCAGATTGGACTTCGATCTGAAATTTGCGTACAGGTGGAGGGGTAGGGCATCGAAGTCAGTCGCATACGTCTTGAAGATGC > 7:24156/1‑83TAGCAGATTGGACTTCGATCTGAAATTTGCGTACAGGTGGAGGGGTAGGGCATCGAAGTCAGTCGCATACGTCTTGAAGATGC < 8:24156/83‑1 GGGTAGGGCATCGAAGTCAGTCGCATACGTCTTGAAGATGCCCTACCCCTCCACCTGTACGCAAATTTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTGAAATTGACCCCTCAGCAGTGACGCCAGCAGAACT > 8:64536/1‑149 GGTAGGGCATCGAAGTCAGTCGCATACGTCTTGAAGATGCCCTACCCCTCCACCTGTACGCAAATTTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTGAAATTGACCCCTCAGCAGTGACGCCAGCAGAACT > 3:256868/1‑148 GTAGGGCATCGAAGTCAGTCGCATACGTCTTGAAGATGCCCTACCCCTCCACCTGTACGCAAATTTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTGAAATTGACCCCTCAGCAGTGACGCCAGCAGAACTGA < 4:256868/149‑1 CCTACCCCTCCACCTGTACGCAAATTTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTGAAATTGACCCCTCAGCAGTGACGCCAGCAGAACTGATCTCGGGTGATGAGGGAGAGGTCTTGGCAGTTCATTTC > 2:315771/1‑148 CCTACCCCTCCACCTGTACGCAAATTTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTGAAATTGACCCCTCAGCAGTGACGCCAGCAGAACTGATCTCGGGTGATGAGG > 3:305832/1‑125 CCTACCCCTCCACCTGTACGCAAATTTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTGAAATTGACCCCTCAGCAGTGACGCCAGCAGAACTGATCTCGGGTGATGAGG < 4:305832/125‑1 CCTACCCCTCCACCTGTACGCAAAATTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTG > 3:75319/1‑74 CCTACCCCTCCACCTGTACGCAAAATTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTG < 4:75319/74‑1 TAGCAGATTGGACTTCGATCTGAAATTTGCGTACAGGTGGAGGGGTAGGGCATCGAAGTCAGTCGCATACGTCTTGAAGATGCCCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4184930‑4184845‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gatgccctACCCCTCCACCTGTACGCAAATTTCAGATCGAAGTCCAATCTGCTACGTGTTCAGAATGAAATCATCCGTGAAATTGACCCCTCAGCAGTGACGCCAGCAGAACTGATCTCGGGTGATGAGGGAGAGGTCTTGGCAGTTCATTTC > NC_002947/4184885‑4185029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |