| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4902831 = | 32 (0.640) | 4 (0.090) | 4/224 | NT | 11.0% | intergenic (+17/+102) | PP_4310/PP_4311 | hydantoin racemase/D‑amino acid dehydrogenase small subunit |
| ? | NC_002947 | 4902928 = | 37 (0.850) | intergenic (+114/+5) | PP_4310/PP_4311 | hydantoin racemase/D‑amino acid dehydrogenase small subunit | |||||
GTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCGCGAAGAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4902990‑4902831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccgcgaagaggccggCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGT > NC_002947/4902928‑4903059 GTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCGC < 3:305227/149‑1 ACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCGCGAAGAGGCCG < 7:143622/149‑1 TTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCC > 1:270868/1‑148 CTCCTACGAGGACCCCACGGTTTTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCA < 2:270868/149‑1 CTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCC > 3:70332/1‑147 CGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCA < 4:70332/149‑1 GCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGT < 3:310620/148‑1 GCCGCGAAGAGGCCGGCCAGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGT < 7:51991/148‑1 GTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCGCGAAGAGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4902990‑4902831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccgcgaagaggccggCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTACACTGTCCCACCTATGATCGGCACCCCGGTCGGT > NC_002947/4902928‑4903059 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |