New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4902831 =	32 (0.640)	4 (0.090)	4/224	NT	11.0%	intergenic (+17/+102)	PP_4310/PP_4311	hydantoin racemase/D‑amino acid dehydrogenase small subunit
	?	NC_002947	4902928 =	37 (0.850)					intergenic (+114/+5)	PP_4310/PP_4311	hydantoin racemase/D‑amino acid dehydrogenase small subunit

TGAGTGCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAG  >  NC_002947/4902690‑4902978                                                                                                                                              |                                                                                                                                                    tgAGTGCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCctc                                                                                                                                              >  4:306284/1‑149 (MQ=255)      gCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTcgc                                                                                                                                         >  7:185773/1‑149 (MQ=255)      gCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTcgc                                                                                                                                         >  2:135295/1‑149 (MQ=255)          accgaccggggtgccgatcataggtgggacagtgtaccgcaacctgtggctgaacctggggcatggggcgttagggttcaccttggcctgtggcagtgcgcagcgtttggccaggatgatgcgttaagctggCCGGCCTCTTCGCGGc                                                                                                                                      <  7:51991‑M1/16‑1 (MQ=255)          accgaccggggtgccgatcataggtgggacagtgtaccgcaacctgtggctgaacctggggcatggggcgttagggttcaccttggcctgtggcagtgcgcagcgtttggccaggatgatgcgttaagcgggCCGGCCTCTTCGCGGc                                                                                                                                      <  3:310620‑M1/16‑1 (MQ=255)                 cATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTcgc                                                                                                                                         >  6:135341/1‑138 (MQ=255)                 cATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTcgc                                                                                                                                         <  5:135341/138‑1 (MQ=255)                  aTTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCg                                                                                                                              >  2:292818/1‑148 (MQ=255)                      ccGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTcc                                                                                                                          >  5:204037/1‑148 (MQ=255)                                 gTGCGCATGGTTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCa                                                                                                                <  5:93668/147‑1 (MQ=255)                                      cATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAg                                                                                                         <  8:14294/149‑1 (MQ=255)                                         gggTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCt                                                                                                      >  1:11678/1‑149 (MQ=255)                                          ggTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCt                                                                                                      <  4:278924/148‑1 (MQ=255)                                            tttGAGCTCGTCCAACGTGCGCACCTATGCGACGCCACGGGCTAAGAAAGGGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGTCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGaa                                                                                                   <  8:272468/149‑1 (MQ=255)                                            tttGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGaa                                                                                                   >  6:98777/1‑149 (MQ=255)                                                 gCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCg                                                                                              >  5:105332/1‑149 (MQ=255)                                                     gTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCAGAATACCGTggg                                                                                          <  5:106444/149‑1 (MQ=255)                                                         aaaGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTcc                                                                                      <  2:11678/149‑1 (MQ=255)                                                            tgaacctggggcatggggcgttagggttcaccttggcctgtggcagtgcgcagcgtttggccaggatgatgcgttaagcgggCCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCg                                                                                   <  4:70332‑M1/67‑1 (MQ=255)                                                             tGCGCACCTATGCGAGGCCACGGGCGAAGAAAGTGTTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGt                                                                                  <  4:238997/149‑1 (MQ=255)                                                                  tggggcatggggcgttagggttcaccttggcctgtggcagtgcgcagcgtttggccaggatgatgcgttaagcgggCCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAAAACCGTGGGGTCCTCGTAGGAg                                                                             <  2:270868‑M1/73‑1 (MQ=255)                                                                  aCCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAg                                                                             <  5:276108/149‑1 (MQ=255)                                                                    gggcatggggcgttagggttcaccttggcctgtggcagtgcgcagcgtttggccaggatgatgcgttaagcgggCCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAg                                                                             >  3:70332‑M1/75‑147 (MQ=255)                                                                       tGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCgg                                                                          <  5:98777/147‑1 (MQ=255)                                                                         cGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCtt                                                                       <  3:306284/148‑1 (MQ=255)                                                                            cGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGc                                                                   <  6:105332/149‑1 (MQ=255)                                                                             gcccgtggCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGcc                                                                  >  2:246750/7‑149 (MQ=255)                                                                                  gggCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTg                                                                                            >  4:298601/1‑118 (MQ=255)                                                                                  gggCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTg                                                                                            <  3:298601/118‑1 (MQ=255)                                                                                   gggttcaccttggcctgtggcagtgcgcagcgtttggccaggatgatgcgttaagcgggCCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGaa                                                             >  1:270868‑M1/60‑148 (MQ=255)                                                                                    gCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAaga                                                           <  1:246750/149‑1 (MQ=255)                                                                                     cGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGACTTTAGCCGCGAagag                                                          <  1:292818/149‑1 (MQ=255)                                                                                      gaagaaAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAgg                                                         <  1:135295/149‑1 (MQ=255)                                                                                       aagaaAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAggc                                                        >  1:2857/1‑149 (MQ=255)                                                                                              tggtggGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCg                                                 >  5:76193/1‑149 (MQ=255)                                                                                                            tggcgcTGCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGGGGCTGATGCCGCTCATCCCGCACCAGCACAAGCCTTAATCCGGTGGGGCCCTCGTCGGCGGGGCTTTAGCCGCTAAGTGGCCGGCCCGCTTAACGCatcatc                                   <  6:76193/147‑1 (MQ=255)                                                                                                                    cGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCa                            >  4:254510/1‑148 (MQ=255)                                                                                                                          cTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCGTAACGCATCATCCTGGCCAAACGCTg                     >  8:51991/1‑149 (MQ=255)                                                                                                                                             aCCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTGCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAg  >  5:167192/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                    TGAGTGCAGCGGTGACCATTGCCGAATCGCTGGTGCGCATGGGTTTGAGCACGTCCAAAGTGCGCACCTATGCGACGCCACGGGCGAAGAAAGTGGTGGGCTGGCCGATGCGCTTCGGCCGCTAGAGATCCTTCGCCTGTACCGGCCTCTTCGCGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAG  >  NC_002947/4902690‑4902978

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.