New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4904612	53 (1.050)	3 (0.070)	3/236	NT	5.7%	coding (222/663 nt)	PP_4312	hypothetical protein
	?	NC_002947	= 4904655	51 (1.110)					coding (179/663 nt)	PP_4312	hypothetical protein

ATATTCACCGGCAAGCCGAGGCGGATGGCACTGGGGGTGATGGTCATCAATGGGCGGATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4904460‑4904612 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgggcagtTGAACTGCCAAGGTCTCAACCGTGCGCTGGACCTGGCCAGTGTACTGCCCGAGCGCTTTGGCAAGGCCGACTACGTGTTTGCCGCCAACCCCACGCGGCATGTCGAGGAAGGCAGCCGGGACGAAAGCTACAGCTACAT  <  NC_002947/4904655‑4904517                                                                                                                                                                                                                                                                                                      ATATTCACCGGCAAGCCGAGGCGGATGGCACTGGGGGTGATGGTCATCAATGGGCGGATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGG                                                                                                                                                 <  4:41885/149‑1                                                CAATGGGCGGATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCA                                                                                                                                               >  7:77578/1‑104                                                CAATGGGCGGATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCA                                                                                                                                               <  8:77578/104‑1                                                    GGGCGGATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTTGAACTGCCAAGGTCTCAACCGTGCGCTGGACCTGGCCAGTGTACTG                                                                                              >  4:250904/1‑149                                                      GCGGATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTTGAACTGCCAAGGTCTCAACCGTGCGCTGGACCTGGCCAGTGTACTGCC                                                                                            <  3:220590/149‑1                                                               GCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTTGAACTGCCAAGGTCTCAACCGTGCGCTGGACCTGGCCAGTGTACTGCCCGAGCGCTT                                                                                   <  3:250904/149‑1                                                                                                                                                CTCGGGCAGTTGAACTGCCAAGGTCTCAACCGTGCGCTGGACCTGGCCAGTGTACTGCCCGAGCGCTTTGGCAAGGCCGACTACGTGTTTGCCGCCAACCCCACGCGGCATGTCGAGGAAGGCAGCCGGGACGAAAGCTACAGCTACAT  >  6:125456/1‑149                                                                                                                                                         TTGAACTGCCAAGGTCTCAACCGTGCGCTGGACCTGGCCAGTGTACTGCCCGAGCGCTTTGGCAAGGCCGACTACGTGTTTGCCGCCAACCCCACGCGGCATGTCGAGGAAGGCAGCCGGGACGA                 <  1:209710/125‑1                                                                                                                                                         TTGAACTGCCAAGGTCTCAACCGTGCGCTGGACCTGGCCAGTGTACTGCCCGAGCGCTTTGGCAAGGCCGACTACGTGTTTGCCGCCAACCCCACGCGGCATGTCGAGGAAGGCAGCCGGGACGA                 >  2:209710/1‑125                                                                                                                                                                                                                                                                                                      ATATTCACCGGCAAGCCGAGGCGGATGGCACTGGGGGTGATGGTCATCAATGGGCGGATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4904460‑4904612 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gctcgggcagtTGAACTGCCAAGGTCTCAACCGTGCGCTGGACCTGGCCAGTGTACTGCCCGAGCGCTTTGGCAAGGCCGACTACGTGTTTGCCGCCAACCCCACGCGGCATGTCGAGGAAGGCAGCCGGGACGAAAGCTACAGCTACAT  <  NC_002947/4904655‑4904517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.