New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4904612	53 (1.050)	3 (0.070)	3/236	NT	5.7%	coding (222/663 nt)	PP_4312	hypothetical protein
	?	NC_002947	= 4904655	51 (1.110)					coding (179/663 nt)	PP_4312	hypothetical protein

ATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGA  >  NC_002947/4904517‑4904801                                                                                                                                             |                                                                                                                                                   aTGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAactgcccgag                                                                                                                                          >  6:125456‑M2/1‑139 (MQ=255)     agctgtagctTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCt                                                                                                                                      >  2:41866/1‑149 (MQ=255)      gctgtagctTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCtt                                                                                                                                     <  8:10017/149‑1 (MQ=255)      gctgtagctTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCt                                                                                                                                      <  7:25069/148‑1 (MQ=255)         gtagctTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGc                                                                                                                                  >  1:55048/1‑149 (MQ=255)            gctTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCg                                                                                                                               >  8:270075/1‑149 (MQ=255)                tCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAa                                                                                                                                                   <  1:209710‑M2/125‑2 (MQ=255)                tCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAa                                                                                                                                                   >  2:209710‑M2/1‑124 (MQ=255)                tCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCtt                                                                                                                           >  1:17494/1‑149 (MQ=255)                 cGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCtt                                                                                                                           <  2:17494/148‑1 (MQ=255)                  gTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTtct                                                                                                                         >  1:324171/1‑149 (MQ=255)                            ccTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACg                                                                                                               >  2:21304/1‑149 (MQ=255)                                ccTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCa                                                                                                             <  2:55048/147‑1 (MQ=255)                                 cTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGaa                                                                                                          <  1:21304/149‑1 (MQ=255)                                  tCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGaaa                                                                                                         >  7:70297/1‑149 (MQ=255)                                  tCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGaaa                                                                                                         >  7:95863/1‑149 (MQ=255)                                  tCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCAGGCTTCTCGCCATGACGCAGaaa                                                                                                         >  3:179037/1‑149 (MQ=255)                                   cGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGaaa                                                                                                         >  2:265507/1‑148 (MQ=255)                                    gACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGaaa                                                                                                         <  5:301913/147‑1 (MQ=255)                                      cATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAacac                                                                                                      >  5:75294/1‑148 (MQ=255)                                        tGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAg                                                                                                   <  8:95863/149‑1 (MQ=255)                                          ccGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAgg                                                                                                  <  5:242654/148‑1 (MQ=255)                                              gTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTg                                                                                             <  6:75294/149‑1 (MQ=255)                                                ggggTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGGAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTggg                                                                                           >  1:125591/1‑149 (MQ=255)                                                       gcggcAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCAt                                                                                     <  2:154518/148‑1 (MQ=255)                                                         ggcAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCt                                                                                              >  2:282174/1‑137 (MQ=255)                                                         ggcAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCt                                                                                              <  1:282174/137‑1 (MQ=255)                                                            aaaCACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCCCCg                                                                               >  8:255757/1‑149 (MQ=255)                                                            aaaCACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCg                                                                               >  2:100372/1‑149 (MQ=255)                                                            aaaCACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCg                                                                               <  4:179037/149‑1 (MQ=255)                                                            aaaCACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCg                                                                               >  8:171179/1‑149 (MQ=255)                                                             aaCACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCgg                                                                              <  8:70297/149‑1 (MQ=255)                                                                 cGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTtgt                                                                          <  7:270075/149‑1 (MQ=255)                                                                    aGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGcc                                                                       >  3:242467/1‑149 (MQ=255)                                                                           cTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCttt                                                                <  2:324171/149‑1 (MQ=255)                                                                              gCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTc                                                               <  7:171179/147‑1 (MQ=255)                                                                              gCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGa                                                             >  3:2200/1‑149 (MQ=255)                                                                                cAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGa                                                             >  1:220327/1‑147 (MQ=255)                                                                                 aaaGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAg                                                          <  1:41866/149‑1 (MQ=255)                                                                                 aaaGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAg                                                          >  7:213297/1‑149 (MQ=255)                                                                                  aaGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGGCTCACATCAAGACCCCAACCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACa                                                           <  1:265507/149‑1 (MQ=255)                                                                                  aaGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAactgcccgagcgctttggcaaggccgactacgtgtttgccgccaaccccacgcggcatgtcgaggaaggcagccgggacgaaagctacagc                                                         <  3:250904‑M2/149‑92 (MQ=255)                                                                                   aGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGcc                                                        <  2:125591/149‑1 (MQ=255)                                                                                          gggCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAgcg                                                 >  1:61406/1‑149 (MQ=255)                                                                                           ggCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAactgcccgagcgctttggcaaggccgactacgtgtttgccgccaaccccacgcggcatgtcgaggaaggcagccgggacgaaagctacagctacatccgc                                                <  3:220590‑M2/149‑101 (MQ=255)                                                                                             cAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAactgcccgagcgctttggcaaggccgactacgtgtttgccgccaaccccacgcggcatgtcgaggaaggcagccgggacgaaagctacagctacatccgccc                                              >  4:250904‑M2/1‑47 (MQ=255)                                                                                               gTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAAc                                            <  4:2200/149‑1 (MQ=255)                                                                                                     tGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCg                                                                               <  7:210152/108‑1 (MQ=255)                                                                                                     tGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCg                                                                               >  8:210152/1‑108 (MQ=255)                                                                                                       gCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAAcggcgcggc                                    >  7:40908/1‑149 (MQ=255)                                                                                                        ccAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAACCACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAAcggcgcggc                                    >  1:17256/1‑148 (MQ=255)                                                                                                            gTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATgg                               <  8:40908/149‑1 (MQ=255)                                                                                                             tCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATgg                               >  1:166585/1‑148 (MQ=255)                                                                                                              ccAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCa                             <  5:21949/149‑1 (MQ=255)                                                                                                                aGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGt                           <  4:242467/149‑1 (MQ=255)                                                                                                                   gcACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGTGAg                        <  6:48515/149‑1 (MQ=255)                                                                                                                           gagaCCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCTGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAgg                 <  4:97354/148‑1 (MQ=255)                                                                                                                             gaCCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGt                           <  8:20648/136‑1 (MQ=255)                                                                                                                             gaCCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGt                           >  7:20648/1‑136 (MQ=255)                                                                                                                                cTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTcag            >  1:61432/1‑148 (MQ=255)                                                                                                                                            cAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTga  <  2:61406/148‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                   ATGTAGCTGTAGCTTTCGTCCCGGCTGCCTTCCTCGACATGCCGCGTGGGGTTGGCGGCAAACACGTAGTCGGCCTTGCCAAAGCGCTCGGGCAGTACACTGGCCAGGTCCAGCGCACGGTTGAGACCTTGG‑‑CAGTTCAACTGCCCGAGCCCTTCGCCCGGCTTCTCGCCATGACGCAGAAACACCAGGGTCTGGGTGCCATCCACCGGTTGTGCCCGGCTTTCGACAGCCTCCAGCGCCAACGGCGCGGCGATGGCAGTGAGCACCAGGCTCAGCAGCAAGTGA  >  NC_002947/4904517‑4904801

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.