New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4918927 = | 51 (1.010) | 4 (0.080) | 4/244 | NT | 7.1% | coding (1326/1557 nt) | PP_4328 | hypothetical protein |
? | NC_002947 | 4918982 = | 57 (1.200) | coding (1381/1557 nt) | PP_4328 | hypothetical protein |
GTCGCCGACTTCCAGGCCCCGGGCCAGCAGGCGCGCGCGCAGCGCGCCAAGCTGGGTGTCGATCAACCGCGCGGTCTGCTCGCGCTCCGCCCATAGCTGCCCGCTCAGGCGGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCC‑‑‑‑GAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4919080‑4918927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCGGCGACCTGGAGTGCCACCCGGGCATCCCGCCGCAGGGGCCACGCACACGGATG > NC_002947/4918982‑4919128 GTCGCCGACTTCCAGGCCCCGGGCCAGCAGGCGCGCGCGCAGCGCGCCAAGCTGGGTGTCGATCAACCGCGCGGTCTGCTCGCGCTCCGCCCATAGCTGCCCGCTCAGGCGGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCC‑‑‑‑GA < 8:169345/149‑1 CGCCGACTTCCAGGCCCCGGGCCAGCAGGCGCGCGCGCAGCGCGCCAAGCTGGGTGTCGATCAACCGCGCGGTCTGCTCGCGCTCCGCCCATAGCTGCCCGCTCAGGCGGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCC‑‑‑‑GAGC > 8:29349/1‑149 CGACTTCCAGGCCCCGGGCCAGCAGGCGCGCGCGCAGCGCGCCAAGCTGGGTGTCGATCAACCGCGCGGTCTGCTCGCGCTCCGCCCATAGCTGCCCGCTCAGGCGGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCC‑‑‑‑GAGCGGG < 6:211588/149‑1 TGCCCGCTCAGGCGGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCC‑‑‑‑GAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGC > 3:139742/1‑124 TGCCCGCTCAGGCGGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCC‑‑‑‑GAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGC < 4:139742/124‑1 CCGCTCAGGCGGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCC‑‑‑‑GAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCGG > 1:22612/1‑149 GGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCGGCGACCT > 1:132596/1‑149 GGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCGGCGACCTGGAGTGCCACCCGGGCATCCCGCCGCAGGGGCCACGCACACGGAT < 2:132596/149‑1 GGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCGGCGACCTGGAGTGCCACCCGGGCATCCCGCCGCAGGGGCCACGCACACGGAT < 7:206278/149‑1 GGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCGGCGACTTGGAGTGCCACCCGGGCATCCCGCCGCAGGGGCCACGCACACGGATG < 1:75849/149‑1 GCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCGGCGACCTGGAGTGCCACCCGGGCATCCCGCCGCAGGGGCCACGCACACGGATG > 4:23692/1‑148 GTCGCCGACTTCCAGGCCCCGGGCCAGCAGGCGCGCGCGCAGCGCGCCAAGCTGGGTGTCGATCAACCGCGCGGTCTGCTCGCGCTCCGCCCATAGCTGCCCGCTCAGGCGGCCCTCGCTCAGTTGTGCCTGCACTTGCAGGGGGCC‑‑‑‑GAGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4919080‑4918927 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gagcgggCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCGGCGACCTGGAGTGCCACCCGGGCATCCCGCCGCAGGGGCCACGCACACGGATG > NC_002947/4918982‑4919128 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |