New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 4918927 =51 (1.010)4 (0.080) 4/244 NT 7.1% coding (1326/1557 nt) PP_4328 hypothetical protein
?NC_002947 4918982 = 57 (1.200)coding (1381/1557 nt) PP_4328 hypothetical protein

AGTGCCGATCCGCCACGGCCAGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCG  >  NC_002947/4918780‑4919075
                                                                                                                                                   |                                                                                                                                                          
catccgtgtgcgtggcccctgcggcgggatgcccgggtggcactccaggtcgccgacttccaggccccgggccagcaggcgcgcgcgcagcgcgccaagctgggtgtcgatcaaccgcgcggtctgctcgcgctccgcccatagctgc                                                                                                                                                            >  4:23692‑M1/148‑148 (MQ=255)
catccgtgtgcgtggcccctgcggcgggatgcccgggtggcactccaagtcgccgacttccaggccccgggccagcaggcgcgcgcgcagcgcgccaagctgggtgtcgatcaaccgcgcggtctgctcgcgctccgcccatagctgcc                                                                                                                                                           <  1:75849‑M1/2‑1 (MQ=255)
 atccgtgtgcgtggcccctgcggcgggatgcccgggtggcactccaggtcgccgacttccaggccccgggccagcaggcgcgcgcgcagcgcgccaagctgggtgtcgatcaaccgcgcggtctgctcgcgctccgcccatagctgccc                                                                                                                                                          <  2:132596‑M1/3‑1 (MQ=255)
 atccgtgtgcgtggcccctgcggcgggatgcccgggtggcactccaggtcgccgacttccaggccccgggccagcaggcgcgcgcgcagcgcgccaagctgggtgtcgatcaaccgcgcggtctgctcgcgctccgcccatagctgccc                                                                                                                                                          <  7:206278‑M1/3‑1 (MQ=255)
      gATCCGCCACGGCCAGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGAATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑g                                                                                                                                                 <  2:96238/149‑1 (MQ=255)
       aTCCGCCACGGCCAGGACTTCATCCCGCTCCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCAAAGAACCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑gg                                                                                                                                                >  4:94813/1‑149 (MQ=255)
              aCGGCCAGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGCACCCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCCTCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTg                                                                                                                                         >  5:251008/1‑149 (MQ=255)
                  ccAGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAg                                                                                                                                     >  3:182233/1‑149 (MQ=255)
                   cAGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGt                                                                                                                                    >  8:33630/1‑149 (MQ=255)
                    aGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTcc                                                                                                                                                            <  5:49656/128‑1 (MQ=255)
                    aGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTcc                                                                                                                                                            >  6:49656/1‑128 (MQ=255)
                    aGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTg                                                                                                                                   >  4:165710/1‑149 (MQ=255)
                           cATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCACACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGca                                                                                                                             >  1:317565/1‑148 (MQ=255)
                                              aggtcgccgacttccaggccccgggccagcaggcgcgcgcgcagcgcgccaagctgggtgtcgatcaaccgcgcggtctgctcgcgctccgcccatagctgCCCGCTCAGGCGGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGgcc                                                                                                             >  1:132596‑M1/102‑149 (MQ=255)
                                               tGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCt                                                                                                         >  1:184768/1‑148 (MQ=255)
                                                   gcgcGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCg                                                                                                    <  3:165710/149‑1 (MQ=255)
                                                    cgcgAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCgg                                                                                                   >  2:75849/1‑149 (MQ=255)
                                                    ccgacttccaggccccgggccagcaggcgcgcgcgcagcgcgccaagctgggtgtcgatcaaccgcgcggtctgctcgcgctccgcccatagctgCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCgg                                                                                                   >  1:22612‑M1/96‑149 (MQ=255)
                                                       gaagaaACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCggg                                                                                                  >  3:183708/1‑147 (MQ=255)
                                                        aagaaACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAg                                                                                               >  2:77394/1‑149 (MQ=255)
                                                        aagaaACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAg                                                                                               <  8:257827/149‑1 (MQ=255)
                                                             aCCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGATCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCTCAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATg                                                                                          <  3:94813/149‑1 (MQ=255)
                                                             aCCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATg                                                                                          >  4:63506/1‑149 (MQ=255)
                                                                ccACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGc                                                                                       >  4:148414/1‑149 (MQ=255)
                                                                 cacaACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCg                                                                                      >  2:115835/1‑149 (MQ=255)
                                                                    aacaacaGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGgccgc                                                                                                           <  4:282073/125‑1 (MQ=255)
                                                                    aacaacaGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGgccgc                                                                                                           >  3:282073/1‑125 (MQ=255)
                                                                    aacaacaGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAg                                                                                   <  3:148414/149‑1 (MQ=255)
                                                                       aacaGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAgcgc                                                                                <  4:183708/149‑1 (MQ=255)
                                                                       aacaGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAgcgc                                                                                >  8:246652/1‑149 (MQ=255)
                                                                        acaGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGcac                                                                                                                            <  4:184886/104‑1 (MQ=255)
                                                                        acaGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGcac                                                                                                                            >  3:184886/1‑104 (MQ=255)
                                                                        acaGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGcgcg                                                                               <  2:317565/149‑1 (MQ=255)
                                                                         caGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGa                                                                              <  2:184768/149‑1 (MQ=255)
                                                                          aGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAg                                                                             <  4:182233/149‑1 (MQ=255)
                                                                            gCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAg                                                                             >  8:177305/1‑147 (MQ=255)
                                                                                gcgcgcgcagcgcgccaagctgggtgtcgatcaaccgcgcggtctgctcgcgctccgcccatagctgCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCa                                                                                                <  4:139742‑M1/57‑1 (MQ=255)
                                                                                gcgcgcgcagcgcgccaagctgggtgtcgatcaaccgcgcggtctgctcgcgctccgcccatagctgCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCa                                                                                                >  3:139742‑M1/68‑124 (MQ=255)
                                                                                       aCATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACACCTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGt                                                               >  6:199558/1‑149 (MQ=255)
                                                                                       aCATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGt                                                               <  7:33630/149‑1 (MQ=255)
                                                                                                ccAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGACTTCGACCTGTCACCGCTC‑‑‑‑GGACCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATTGGCGGAGCGCGAGCAGACCGCGCGGTGGATCGcca                                                      >  4:259840/1‑149 (MQ=255)
                                                                                                  aaGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGCGCAGACCGCGCGGTTGATCGACAcc                                                    >  4:263739/1‑149 (MQ=255)
                                                                                                    gACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCa                                                  <  6:251008/149‑1 (MQ=255)
                                                                                                          cGACAAGCCCTGTTGCGCATCGATCTGGCCTTCGAACTGTCCCCGCTC‑‑‑‑GGGCCCCTGCAAGTGCAGGCAAAACTTAGCGAGGGCCGCCTGAGCGGGCATCTATGGGCGGATCGCGAGTCAGACCGCGCGGTTGATCGACACCCAGCTTg                                             <  1:34855/149‑1 (MQ=255)
                                                                                                             cAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGgcgc                                         >  7:29349/1‑149 (MQ=255)
                                                                                                                    tgtgGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCAGgcgcgcgcgcag                                 >  7:90204/1‑143 (MQ=255)
                                                                                                                          gcATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCGGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTgcgcgcgcgc                           >  1:147273/1‑149 (MQ=255)
                                                                                                                           cATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGcc                          >  7:272093/1‑149 (MQ=255)
                                                                                                                             tCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATggg                                                                                        <  8:64328/87‑1 (MQ=255)
                                                                                                                             tCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATggg                                                                                        >  7:64328/1‑87 (MQ=255)
                                                                                                                             tCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCctg                        <  1:77394/149‑1 (MQ=255)
                                                                                                                               gAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGAc                                                                       >  1:82436/1‑101 (MQ=255)
                                                                                                                               gAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGAc                                                                       <  2:82436/101‑1 (MQ=255)
                                                                                                                               gAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCctgc                       <  3:63506/148‑1 (MQ=255)
                                                                                                                                aGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCctgctg                     >  6:243164/1‑149 (MQ=255)
                                                                                                                                  cTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCAGGCGCGCGCGCAGCGCGccaagctgg                   <  8:90204/148‑8 (MQ=255)
                                                                                                                                   tGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGcc                  >  5:314609/1‑149 (MQ=255)
                                                                                                                                       cTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCggg              <  8:127501/149‑1 (MQ=255)
                                                                                                                                       cTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCggg              >  2:9515/1‑149 (MQ=255)
                                                                                                                                       cTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCggg              <  5:243164/149‑1 (MQ=255)
                                                                                                                                             ccTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTg         >  5:286989/1‑148 (MQ=255)
                                                                                                                                                 tCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGaa      <  7:177305/147‑1 (MQ=255)
                                                                                                                                                 tCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGt    <  3:263739/149‑1 (MQ=255)
                                                                                                                                                   CCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCg  <  6:211588‑M1/149‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                          
AGTGCCGATCCGCCACGGCCAGGACTTCATCCCGCTGCAAGTCAAACTGCAGCGCGAAGAAACCCCACAACAACAGGCCGACCGCCAACATGAAGCCCAAGACCCTCGACAAGCCCTGTGGCGCATCGAGCTGGCCTTCGACCTGTCCCCGCTC‑‑‑‑GGCCCCCTGCAAGTGCAGGCACAACTGAGCGAGGGCCGCCTGAGCGGGCAGCTATGGGCGGAGCGCGAGCAGACCGCGCGGTTGATCGACACCCAGCTTGGCGCGCTGCGCGCGCGCCTGCTGGCCCGGGGCCTGGAAGTCG  >  NC_002947/4918780‑4919075

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.