New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5290471	52 (1.030)	3 (0.060)	3/248	NT	5.3%	coding (69/882 nt)	PP_4664	LysR family transcriptional regulator
	?	NC_002947	= 5290501	57 (1.180)					coding (99/882 nt)	PP_4664	LysR family transcriptional regulator

TCGTCATGGGCCGATGATGCCGTGCACCGGGCGACGTGAGAATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5290319‑5290471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcTGCCGGCAGTGACAGATGGCTGCGGCCGGCGCCAGCGGTGATGTTGCCGCACTCCAGGGTGTGCTGGAACAGCTTGAGGTCGATCAGGTCGAAATGCATGTGGCTCTGTCCTGGCAAGAGGCTGGCTGAGTATATGGCAGATTCT  <  NC_002947/5290501‑5290357                                                                                                                                                                                                                                                                                                            tcggatTGGTCCGTTGATGCCGTGCACCGGGCGACGTGAGAATGTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGC                                                                                                                                                       <  8:129142/143‑1                                          ATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCTACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCTGCCGGCAGTGACAGATGGCTGCGGCCGGCGCCAGCG                                                                                                              <  4:61354/149‑1                                               CCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGC                                                                                                                                                   >  7:274416/1‑107                                               CCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGC                                                                                                                                                   <  8:274416/107‑1                                                       TCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCTGCCGGCAGTGACAGATGGCTGCGGCCGGCGCCAGCGGTGAT                                                                                                         >  7:146582/1‑141                                                       TCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCTGCCGGCAGTGACAGATGGCTGCGGCCGGCGCCAGCGGTGAT                                                                                                         <  8:146582/141‑1                                                                                                                                                        GCTGCCGGCAGTGACAGATGGCTGCGGCCGGCGCCAGCGGTGATGTTGCCGCACTCCAGGGTGTGCTGGAACAGCTTGAGGTCGATCAGGTCGAAATGCATGTGGCTCTGTCCTGGCAAGAGGCTGGCTGAGTATATGGCAGATTCT  <  2:271101/147‑1                                                                                                                                                                                                                                                                                                            TCGTCATGGGCCGATGATGCCGTGCACCGGGCGACGTGAGAATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5290319‑5290471 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcTGCCGGCAGTGACAGATGGCTGCGGCCGGCGCCAGCGGTGATGTTGCCGCACTCCAGGGTGTGCTGGAACAGCTTGAGGTCGATCAGGTCGAAATGCATGTGGCTCTGTCCTGGCAAGAGGCTGGCTGAGTATATGGCAGATTCT  <  NC_002947/5290501‑5290357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.