New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 529047152 (1.030)3 (0.060) 3/248 NT 5.3% coding (69/882 nt) PP_4664 LysR family transcriptional regulator
?NC_002947 = 5290501 57 (1.180)coding (99/882 nt) PP_4664 LysR family transcriptional regulator

AGAATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTGCAGTT  >  NC_002947/5290357‑5290647
                                                                                                                                                |                                                                                                                                                  
agaATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAgc                                                                                                                                                  <  2:271101‑M2/147‑3 (MQ=255)
  aaTCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGt                                                                                                                                              >  5:253843/1‑149 (MQ=255)
      tGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTgc                                                                                                                                            <  2:187130/147‑1 (MQ=255)
      tGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTgc                                                                                                                                            >  1:187130/1‑147 (MQ=255)
                  agccagccTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCa                                                                                                                              >  6:67761/1‑149 (MQ=255)
                            ttGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCAt                                                                                                                     >  5:3392/1‑148 (MQ=255)
                                cAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTg                                                                                                                <  5:67761/149‑1 (MQ=255)
                                 aGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTgg                                                                                                               <  6:298181/149‑1 (MQ=255)
                                  ggACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTggg                                                                                                              <  4:193351/149‑1 (MQ=255)
                                      agagCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCAtt                                                                                                          >  5:171323/1‑149 (MQ=255)
                                          ccACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTcgc                                                                                                                                  >  2:13240/1‑121 (MQ=255)
                                          ccACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTcgc                                                                                                                                  <  1:13240/121‑1 (MQ=255)
                                            acaTGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTg                                                                                                    >  5:250531/1‑149 (MQ=255)
                                               tGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTg                                                                                                 <  6:250531/149‑1 (MQ=255)
                                                gCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTgg                                                                                                               <  4:262778/134‑1 (MQ=255)
                                                gCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTgg                                                                                                               <  7:241984/134‑1 (MQ=255)
                                                gCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTgg                                                                                                               >  8:241984/1‑134 (MQ=255)
                                                gCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTgg                                                                                                               >  3:262778/1‑134 (MQ=255)
                                                gCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTg                                                                                                 >  7:140879/1‑148 (MQ=255)
                                                  aTTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGaa                                                                                              <  2:170694/149‑1 (MQ=255)
                                                      cGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGt                                                                                           >  5:167245/1‑148 (MQ=255)
                                                       gACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTaa                                                                                         <  6:171323/149‑1 (MQ=255)
                                                       gACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTaa                                                                                         >  1:126852/1‑149 (MQ=255)
                                                        aCCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAAc                                                                                        >  5:209172/1‑149 (MQ=255)
                                                             aTCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAAccgccg                                                                                   >  3:312046/1‑149 (MQ=255)
                                                              tCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGt                                                                                  >  5:32383/1‑149 (MQ=255)
                                                                 aCCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTc                                                                                                                                    <  3:177555/96‑1 (MQ=255)
                                                                 aCCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTc                                                                                                                                    >  4:177555/1‑96 (MQ=255)
                                                                  ccTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCg                                                                              >  2:184631/1‑149 (MQ=255)
                                                                    tCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTa                                                                            >  7:121483/1‑149 (MQ=255)
                                                                    tCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTa                                                                            >  2:265405/1‑149 (MQ=255)
                                                                      aaGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGTCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTAc                                                                           <  8:276936/148‑1 (MQ=255)
                                                                      aaGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTAc                                                                           >  1:137914/1‑148 (MQ=255)
                                                                       aGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTAcaa                                                                         <  6:167245/149‑1 (MQ=255)
                                                                         cTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTAcaac                                                                        >  1:259102/1‑148 (MQ=255)
                                                                             tCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACg                                                                   >  2:50206/1‑149 (MQ=255)
                                                                                aGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCg                                                                <  1:271101/149‑1 (MQ=255)
                                                                                       ccTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAAc                                                                                             >  3:261053/1‑113 (MQ=255)
                                                                                       ccTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAAc                                                                                             <  4:261053/113‑1 (MQ=255)
                                                                                       ccTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGc                                                          >  6:138123/1‑148 (MQ=255)
                                                                                           gAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAg                                                       <  8:140879/147‑1 (MQ=255)
                                                                                           gAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAg                                                       <  1:50206/147‑1 (MQ=255)
                                                                                            aGTGCGGCAACATCACCGCTGGCGCCGGCCTCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCa                                                    <  1:184631/149‑1 (MQ=255)
                                                                                                cGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCActc                                                 <  8:121483/148‑1 (MQ=255)
                                                                                                cGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCActc                                                 <  4:312046/148‑1 (MQ=255)
                                                                                                       aTCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAgccagcggtgatgttgccgcactccagggtgtgctggaacagcttgaggtcgatcaggtcgaaatgcatgtggctctgtcctggcaagaggctggctga                                                 <  8:146582‑M2/141‑100 (MQ=255)
                                                                                                       aTCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAgccagcggtgatgttgccgcactccagggtgtgctggaacagcttgaggtcgatcaggtcgaaatgcatgtggctctgtcctggcaagaggctggctga                                                 >  7:146582‑M2/1‑42 (MQ=255)
                                                                                                       aTCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTgcagca                                         >  6:250818/1‑149 (MQ=255)
                                                                                                         cACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATg                                       >  7:41060/1‑149 (MQ=255)
                                                                                                            cGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAgccagcggtgatgttgccgcactccagggtgtgctggaacagcttgaggtcgatcaggtagaaatgcatgtggctctgtcctggcaagaggctggctgagtatatggcagat                                    <  4:61354‑M2/149‑113 (MQ=255)
                                                                                                                 gcgcCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGcca                               <  6:32383/149‑3 (MQ=255)
                                                                                                                         cgCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACg                         >  3:198793/1‑147 (MQ=255)
                                                                                                                         cgCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACg                         >  1:218588/1‑147 (MQ=255)
                                                                                                                            aGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCTTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACgcag                      >  6:31764/1‑147 (MQ=255)
                                                                                                                            aGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACgcagca                    <  5:250818/149‑1 (MQ=255)
                                                                                                                            aGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACgcag                      >  3:131096/1‑147 (MQ=255)
                                                                                                                            aGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACgcag                      <  4:131096/147‑1 (MQ=255)
                                                                                                                               cATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGt                 <  2:70788/149‑1 (MQ=255)
                                                                                                                                    gTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAAc            >  5:46755/1‑149 (MQ=255)
                                                                                                                                    gTCACTGCCCGCAGCCAGTGCGAGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTCGAACGTAACAGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGAAGCAGGTCGAAc            >  4:137826/1‑149 (MQ=255)
                                                                                                                                     tCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGaa             <  2:259102/147‑1 (MQ=255)
                                                                                                                                     tCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAAc            <  8:41060/148‑1 (MQ=255)
                                                                                                                                       aCTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGcc         >  1:72343/1‑149 (MQ=255)
                                                                                                                                        cTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCt        >  2:227378/1‑149 (MQ=255)
                                                                                                                                              gCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTGCAGtt  <  4:198793/149‑1 (MQ=255)
                                                                                                                                              gCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTGCAGtt  <  2:218588/149‑1 (MQ=255)
                                                                                                                                                |                                                                                                                                                  
AGAATCTGCCATATACTCAGCCAGCCTCTTGCCAGGACAGAGCCACATGCATTTCGACCTGATCGACCTCAAGCTGTTCCAGCACACCCTGGAGTGCGGCAACATCACCGCTGGCGCCGGCCGCAGCCATCTGTCACTGCCGGCAGCCAGTGCGCGCATTCGCGCCATGGAAGCATCACTGGGCATTCCCTTGCTGGAACGTAACCGCCGTGGCGTACAACCAACGCCGGCTGGCCAGGCACTCTTGCAGCATGCACGGCTGATAACGCAGCAGGTCGAACGCCTGCAGTT  >  NC_002947/5290357‑5290647

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.