New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5292588	52 (1.030)	4 (0.080)	4/246	NT	7.2%	coding (262/888 nt)	mmsB	3‑hydroxyisobutyrate dehydrogenase
	?	NC_002947	= 5292610	54 (1.120)					coding (240/888 nt)	mmsB	3‑hydroxyisobutyrate dehydrogenase

GGCGCCGACCATGAACGTCAGGGTGCCGGCCGCCGCGCCGCCAGTACCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5292436‑5292588 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtACTGGCCGGTATTCGTCCTGGCACGCCGAC  <  NC_002947/5292610‑5292581                                                                                                                                                                                         GGCGCCGCCGATGAACGTCAGGGTGCCGGCCGCCGCGCCGCCAGTACCGCCGGAAACCGGCGCATCCCGCATGTGCACGCCCTTTGCCGCTGCGGGGGTGGCCACGTCCGGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCCTCGGTCG                                    >  4:184094/1‑149    GCCGACCATGAACGTCAGGGTGCCGGCCGCCGCGCCGCCAGTACCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCG                                 >  6:313544/1‑149                                               CCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGTACTGGCCGGTATTCGTCCTGGCACGCCGAC  <  1:73678/137‑1                                               CCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGTACTGGCCGGTATTCGTCCTGGCACGCCGAC  >  2:73678/1‑137                                                                                   TTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGTACTGGCCGGTATTCGTCCTGGCACGC      <  1:302975/97‑1                                                                                   TTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGTACTGGCCGGTATTCGTCCTGGCACGC      >  2:302975/1‑97                                                                                                                                                                                         GGCGCCGACCATGAACGTCAGGGTGCCGGCCGCCGCGCCGCCAGTACCACCGGAAACCGGCGCATCCCCCATGTCCACGCCCTTTGCCGCTGCGGCCTTGGACACGTCACGTGCGGTCTGCGGGTCGATGGTGCTGCAGTCAACGGTCGGCGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5292436‑5292588 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcgtACTGGCCGGTATTCGTCCTGGCACGCCGAC  <  NC_002947/5292610‑5292581

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.