| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5345057 = | 48 (0.950) | 4 (0.080) | 4/244 | NT | 8.1% | coding (455/1935 nt) | acsA‑II | acetyl‑CoA synthetase |
| ? | NC_002947 | 5345106 = | 45 (0.940) | coding (504/1935 nt) | acsA‑II | acetyl‑CoA synthetase | |||||
GGCCTTGTCGACGTTCTGTTTCAGCGGGATGCGTTTGCCGCCACGCACGCCTTCATCGGCGGTGATCACGGTGCGGCAGTCGGCATCGAGAATGCGGTCTCGCAAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGCCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5345211‑5345057‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgatgcCTTGCGAGACCGCATTCTCGATGCCGACTGCCGCACCGTGATCACCGCCGATGAAGGCGTGCGTGGCGGCAAACGCATCCCGCTGAAACAGAACGTCGACAAGGCCCTGGCCAGCTGCCCAGCGGTCAGTAGCGTGTTGGTGGT > NC_002947/5345106‑5345249 GGCCTTGTCGACGTTCTGTTTCAGCGGGATGCGTTTGCCGCCACGCACGCCTTCATCGGCGGTGATCACGGTGCGGCAGTCGGCATCGAGAATGCGGTCTCGCAAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGC < 3:307309/149‑1 CCTTGTCGACGTTCTGTTTCAGCGGGATGCGTTTGCCGCCACGCACGCCTTCATCGGCGGTGATCACGGTGCGGCAGTCGGCATCGAGAATGCGGTCTCGCAAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGCCG < 1:169007/149‑1 GTCGACGTTCTGTTTCAGCGGGATGCGTTTGCCGCCACGCACGCCTTCATCGGCGGTGATCACGGTGCGGCAGTCGGCATCGAGAATGCGGTCTCGCAAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGCCGATGC > 1:273286/1‑149 TTCTGTTTCAGCGGGATGCGTTTGCCGCCACGCACGCCTTCATCGGCGGTGATCACGGTGCGGCAGTCGGCATCGAGAATGCGGTCTCGCAAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGC < 5:73228/136‑1 TTCTGTTTCAGCGGGATGCGTTTGCCGCCACGCACGCCTTCATCGGCGGTGATCACGGTGCGGCAGTCGGCATCGAGAATGCGGTCTCGCAAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGC > 6:73228/1‑136 CGAGAATGCGGTCTCGCAAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGCCGATGCCTTGCGAGACCGCATTCTCGATGCCGACTGCCGCACCGTGATCACCGCCGATGAAGGCGTGCGTGGCGGCAAACGCATCC > 6:168907/1‑149 AAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGCCGATGCCTTGCGAGACCGCATTCTCGATGCCGACTGCCGCACCGTGATCACCGCCGATGAAGGCGTGCGTGGCGGCAAACGCATCCCGCTGAAACAGAACGTC > 5:296690/1‑149 GCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGCCGATGCCTTGCGAGACCGCATTCTCGATGCCGACTGCCGCACCGTGTTCACCGCCGATGAAGGCGTGCGTGGCGGCAAACGCATCCCGCTGAAACAGAACGTCGA > 1:84349/1‑148 CGAACACCACCGAGTGGATGGCGCCGATGCCTTGCGAGACCGCATTCTCGATGCCGACTGCCGCACCGTGATCACCGCCGATGAAGGCGTGCGTGGCGGCAAACGCATCCCGCTGAAACAGAACGTCGACAAGGCCCTGGCCAGCTGCC < 5:168907/149‑1 CGATGCCTTGCGAGACCGCATTCTCGATGCCGACTGCAGCACCGTGATCACCGCCGATGAAGGCGTGCGTGGCGGCAAACGCATCCCGCTGAAACAGAACGTCGACAAGGCCCTGGCAAGCTCCCCAGCGGTCAGTAGCGTGTTGGAGG > 7:254177/1‑149 GATGCCTTGCGAGACCGCATTCTCGATGCCGACTGCCGCACCGTGATCACCGCCGATGAAGGCGTGCGTGGCGGCAAACGCATCCCGCTGAAACAGAACGTCGACAAGGCCCTGGCCAGCTGCCCAGCGGTCAGTAGCGTGTTGGTGGT > 4:307083/1‑149 GGCCTTGTCGACGTTCTGTTTCAGCGGGATGCGTTTGCCGCCACGCACGCCTTCATCGGCGGTGATCACGGTGCGGCAGTCGGCATCGAGAATGCGGTCTCGCAAGGCATCGGGGGAGAAACCGCCGAACACCACCGAGTGGATGGCGCCGATGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5345211‑5345057‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgatgcCTTGCGAGACCGCATTCTCGATGCCGACTGCCGCACCGTGATCACCGCCGATGAAGGCGTGCGTGGCGGCAAACGCATCCCGCTGAAACAGAACGTCGACAAGGCCCTGGCCAGCTGCCCAGCGGTCAGTAGCGTGTTGGTGGT > NC_002947/5345106‑5345249 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |