New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5388632 =	56 (1.110)	3 (0.060)	3/250	NT	5.8%	coding (2142/2811 nt)	dld2	D‑lactate dehydrogenase
	?	NC_002947	5388688 =	44 (0.900)					coding (2198/2811 nt)	dld2	D‑lactate dehydrogenase

CAGCAGGGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGCCGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5388692‑5388632 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccTGCTGGAAAAGGCCGGTTACCAGGT‑GGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGCCTCCAAGGGCTACCCCGAGCAGGCCGAACACAAACGCCAGGAGCTGATCACCGCCCTGCTGCACGCCAGCC  >  NC_002947/5388688‑5388831                                                                                                                                                                                                                CAGCAGGGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGCCGGGCCCTGCTGGAAAAGGCCGGTTACCAGGT‑GGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGCCTCCAAGGGCTACCC                                                          >  1:290567/1‑149       GGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGCCGGGCCCTGCTGGAAAAGGCCGGTTACCAGGT‑GGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGCCTCCAAGGGCTACCCCGAG                                                      >  4:46136/1‑147              GTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGCCGGGCCCTGCTGGAAAAGGCCGGTTACCAGGT‑GGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGCCTCCAAGGGCTACCCCGAGCAGGCCGAA                                             <  2:290567/149‑1                                                          GCCCTGCTGGAAAAGGCCGGTTACCAGGTGGGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGCCTCCAAGGGCTACCCCGAGCAGGCCGAACACAAACGCCAGGAGCTGATCACCGCCCTGCTGCACGCCAGCC  >  1:34460/1‑149                                                                                                                                                                                                                CAGCAGGGCGCGGGTTTTGTCCAGCAGCGAGCTTTGCTCGCGGTCGGCATAGGCCGGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/5388692‑5388632 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcccTGCTGGAAAAGGCCGGTTACCAGGT‑GGTGTTCCCCGACAACGCCGACAGCCTGTGCTGCGGCCAACCGTTCGCCTCCAAGGGCTACCCCGAGCAGGCCGAACACAAACGCCAGGAGCTGATCACCGCCCTGCTGCACGCCAGCC  >  NC_002947/5388688‑5388831

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.