| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5846365 | 48 (0.950) | 3 (0.060) | 3/240 | NT | 6.4% | coding (467/813 nt) | mutM | formamidopyrimidine‑DNA glycosylase |
| ? | NC_002947 | = 5846400 | 43 (0.920) | coding (432/813 nt) | mutM | formamidopyrimidine‑DNA glycosylase | |||||
CCAGCACCCGTTTGATCTCGATCGCCAGTTTCAGGTAGCGCGCCCGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5846210‑5846365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacggctGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCATCATGGACAACGCGGTGGTGGTAGGGGTGGGCAACATCTACGCCACCGAGGCGTTGTTTGCCGCCGGTATCGACCCACGCCGAGAGGCGGGCGGGATTTCCCGG < NC_002947/5846400‑5846253 CCAGCACCCGTTTGATCTCGATCGCCAGTTTCAGGTAGCGCGCCCGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGAT > 7:140707/1‑148 GCACCCGTTTGATCTCGATCGCCAGTTTCAGGTAGCGCGCCCGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAAC < 4:247666/149‑1 caCGTTTGATCTCGATCGCCAGTTTCAGGTAGCGCGCCCGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGC > 6:291965/3‑149 ATCGCCAGTTTCAGGTAGCGCGCCCGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGATGTCCATGAT > 6:232484/1‑128 CCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCATa > 3:72485/1‑148 CCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCA < 4:72485/147‑1 CCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCATCATG < 5:313924/149‑1 AACGGCTGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCATCATGGACAACGCGGTGGTGGTAGGG > 3:46750/1‑77 AACGGCTGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCATCATGGACAACGCGGTGGTGGTAGGG < 4:46750/77‑1 AACGGCTGTTCCAGCTGTCCCGCGGGCGGTCCATGGCGGTCAAGCCGTTCATCATGGACAACGCGGTGGTGGTAGGGGTGGGCAACAACTACGCCACCGAGGCGTTGTTTGCCGCCGGAATCGACCCACGCCGAGAGGCGGGCGGGATT > 5:223194/1‑149 ACGGCTGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCATCATGGACAACGCGGTGGTGGTAGGGGTGGGCAACATCTACGCCACCGAGGCGTTGTTTGCCGCCGGTATCGACCCACGCCGAGAGGCGGGCGGGATTT > 5:140116/1‑149 TGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCATCATGGACAACGCGGTGGTGGTAGGGGTGGGCAACATCTACGCCACCGAGGCGTTGTTTGCCGCCGGTATCGACCCACGCCGAGAGGCGGGCGGGATTTCCCGG > 4:295151/1‑149 CCAGCACCCGTTTGATCTCGATCGCCAGTTTCAGGTAGCGCGCCCGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5846210‑5846365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaacggctGTTCCAGCTGTCCCGCGGGCGGTCGATGGCGGTCAAGCCGTTCATCATGGACAACGCGGTGGTGGTAGGGGTGGGCAACATCTACGCCACCGAGGCGTTGTTTGCCGCCGGTATCGACCCACGCCGAGAGGCGGGCGGGATTTCCCGG < NC_002947/5846400‑5846253 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |