New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5846365	48 (0.950)	3 (0.060)	3/240	NT	6.4%	coding (467/813 nt)	mutM	formamidopyrimidine‑DNA glycosylase
	?	NC_002947	= 5846400	43 (0.920)					coding (432/813 nt)	mutM	formamidopyrimidine‑DNA glycosylase

CCGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGACTCCAGCTCGA  >  NC_002947/5846253‑5846545                                                                                                                                                    |                                                                                                                                                  ccGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACa                                                                                                                                                  >  4:295151‑M2/1‑148 (MQ=255)      aaaTCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACagccgt                                                                                                                                             >  5:140116‑M2/1‑143 (MQ=255)       aaTCCCGCCCGCCTCTCGGCGTGGGTCGATTCCGGCGGCAAACAACGCCTCGGTGGCGTAGTTGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATGGACCGCCCGCGGGACAGCTGGAACagccgtt                                                                                                                                            >  5:223194‑M2/1‑142 (MQ=255)              cccgccTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATc                                                                                                                                     <  3:301258/149‑1 (MQ=255)                   ctctCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACa                                                                                                                                <  5:214844/149‑1 (MQ=255)                        ggCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAggtcg                                                                                                                           <  7:220530/149‑1 (MQ=255)                         gCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAggtcgg                                                                                                                          >  6:178220/1‑149 (MQ=255)                         gCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAggtcg                                                                                                                           <  7:259251/148‑1 (MQ=255)                           gTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCAcc                                                                                                                                        >  6:87259/1‑133 (MQ=255)                           gTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCAcc                                                                                                                                        <  5:87259/133‑1 (MQ=255)                               gTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCg                                                                                                                    >  8:181376/1‑149 (MQ=255)                                  gATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCt                                                                                                                 <  5:178220/149‑1 (MQ=255)                                    tACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCa                                                                                                               <  7:182368/149‑1 (MQ=255)                                      ccGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAg                                                                                                              <  3:152715/148‑1 (MQ=255)                                       cggcggCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGc                                                                                                            <  5:122057/149‑1 (MQ=255)                                              aaaCAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCTGCTCAGGCCCCAgga                                                                                                     >  4:278978/1‑148 (MQ=255)                                                  aacGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCgcag                                                                                                 >  8:184711/1‑149 (MQ=255)                                                       cTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATc                                                                                                                                     <  5:208815/108‑1 (MQ=255)                                                       cTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATc                                                                                                                                     >  6:208815/1‑108 (MQ=255)                                                       cTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGt                                                                                             >  1:279363/1‑148 (MQ=255)                                                          ggTGGCGTAGATGTTGCCCACCCCTACCCCCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTaa                                                                                           <  8:166220/147‑1 (MQ=255)                                                          ggTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTaa                                                                                           <  2:279363/147‑1 (MQ=255)                                                                 tAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGtt                                                                                  >  4:242442/1‑149 (MQ=255)                                                                     tGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCCTGTCCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCaga                                                                              <  8:149814/149‑1 (MQ=255)                                                                         gCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATc                                                                                                                                     <  2:205162/90‑1 (MQ=255)                                                                         gCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATc                                                                                                                                     >  1:205162/1‑90 (MQ=255)                                                                         gCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGt                                                                          >  4:147440/1‑149 (MQ=255)                                                                          cccACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGgcg                                                                                                    >  4:137210/1‑122 (MQ=255)                                                                          cccACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGgcg                                                                                                    <  3:137210/122‑1 (MQ=255)                                                                           ccACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTcc                                                                        >  5:169562/1‑149 (MQ=255)                                                                               cccTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACagccgtt                                                                                                                                            <  4:46750‑M2/77‑8 (MQ=255)                                                                               cccTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACagccgtt                                                                                                                                            >  3:46750‑M2/1‑70 (MQ=255)                                                                                 cTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTc                                                                  >  8:211998/1‑149 (MQ=255)                                                                                 cTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTc                                                                  >  4:190042/1‑149 (MQ=255)                                                                                    ccaccaccGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCcac                                                               <  3:242442/149‑1 (MQ=255)                                                                                         accGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCAt                                                          >  2:57881/1‑149 (MQ=255)                                                                                          ccGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGcc                                                                                                           >  3:316411/1‑99 (MQ=255)                                                                                          ccGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGcc                                                                                                           <  4:316411/99‑1 (MQ=255)                                                                                          ccGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATg                                                         >  8:3784/1‑149 (MQ=255)                                                                                             cgTTGTCCATGATGAACGGCTTGACAGCCAACGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGAGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTACAGAGGGTCCAGGCTCCACAGCATGGCa                                                      >  6:221928/1‑149 (MQ=255)                                                                                                  tCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCGAGGCTCCACAGCATGGCACCaaa                                                 <  5:298821/149‑1 (MQ=255)                                                                                                   ccATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAg                                                >  8:112576/1‑149 (MQ=255)                                                                                                    cATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACagccgttcatcatggacaacgcggtggtggtaggggtgggcaacatctacgccaccgaggcgttgtttgccgccggtatcgacccacgccgagaggcggg                                               <  5:313924‑M2/149‑101 (MQ=255)                                                                                                    cATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAgc                                               <  3:190042/149‑1 (MQ=255)                                                                                                       tatgaaCGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACagccgttcatcatggacaacgcggtggtggtaggggtgggcaacatctacgccaccgaggcgttgtttgccgccggtatcgacccacgccgagaggcgggcgg                                            >  3:72485‑M2/2‑46 (MQ=255)                                                                                                        atgaACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGc                                                                    >  3:31324/1‑124 (MQ=255)                                                                                                        atgaACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGc                                                                    <  4:31324/124‑1 (MQ=255)                                                                                                         tgaACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACagccgttcatcatggacaacgcggtggtggtaggggtgggcaacatctacgccaccgaggcgttgtttgccgccggtatcgacccacgccgagaggcgggcgg                                            <  4:72485‑M2/147‑104 (MQ=255)                                                                                                         tgaACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAgcggc                                            >  5:81690/1‑147 (MQ=255)                                                                                                           aaCGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAgg                                        <  7:181376/149‑1 (MQ=255)                                                                                                             cGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGt                                      <  7:3784/149‑1 (MQ=255)                                                                                                                cTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCgg                                   >  2:247844/1‑149 (MQ=255)                                                                                                                    aCCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGgtgt                                >  2:31097/1‑148 (MQ=255)                                                                                                                                cgcccgcGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAg                   >  1:205813/1‑149 (MQ=255)                                                                                                                                      cgGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGa             <  1:57881/149‑1 (MQ=255)                                                                                                                                       gggACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGAc            <  6:169562/149‑1 (MQ=255)                                                                                                                                          aCAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGACTc          >  5:106696/1‑148 (MQ=255)                                                                                                                                               tGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGACTCCAGCTc    >  3:144833/1‑149 (MQ=255)                                                                                                                                                ggAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGACTCCAGCTc    >  2:56922/1‑148 (MQ=255)                                                                                                                                                 gAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGACTCCAGCTCGa  <  7:211998/149‑1 (MQ=255)                                                                                                                                                 gAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGACTCCAGCTCGa  >  2:155263/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                  CCGGGAAATCCCGCCCGCCTCTCGGCGTGGGTCGATACCGGCGGCAAACAACGCCTCGGTGGCGTAGATGTTGCCCACCCCTACCACCACCGCGTTGTCCATGATGAACGGCTTGACCGCCATCGACCGCCCGCGGGACAGCTGGAACAGCCGTTCACCATCGAACAGGTCGGTCAGCGGCTCAGGCCCCAGGCGCAGCAGTAACTCATGGTTCAGAGGGTCCAGGCTCCACAGCATGGCACCAAAGCGGCGAGGGTCGGTGTAACGCAGCATCAGCCCGGACTCCAGCTCGA  >  NC_002947/5846253‑5846545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.