| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5896619 | 33 (0.660) | 3 (0.060) | 3/246 | NT | 8.2% | coding (770/1029 nt) | sbp‑II | sulfate ABC transporter substrate‑binding protein |
| ? | NC_002947 | = 5896646 | 36 (0.750) | coding (743/1029 nt) | sbp‑II | sulfate ABC transporter substrate‑binding protein | |||||
CGGGAACTGCTTGCCGAACTGCGCAGCGACTTTCTCGTCACGCGGGCGGTAGAAGTTCTCGGCGGCAATCTTCTGCCCGGCCGGGCTGTACAGGTGCTTGAGGTATTCGATGGCAATCTCGGTATTGCCCTTCTTCTCGGCGTTCTTGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5896468‑5896619‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgaTCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAAGAACGCCGAGAAGAAGGGCAATACCGAGATTGCCATCGAATACCTCAAGCACCTGTACAGCCCGGCCGGGCAGAAGATTGCCGCCGAGAACTTCTACCGCCCGCGTGAC < NC_002947/5896646‑5896504 CGGGAACTGCTTGCCGAACTGCGCAGCGACTTTCTCGTCACGCGGGCGGTAGAAGTTCTCGGCGGCAATCTTCTGCCCGGCCGGGCTGTACAGGTGCTTGAGGTATTCGATGGCAATCTCGGTATTGCCCTTCTTCTCGGCGTTCTTGT > 4:134646/1‑149CGGGAACTGCTTGCCGAACTGCGCAGCGACTTTCTCGTCACGCGGGCGGTAGAAGTTCTCGGCGGCAATCTTCTGCCCGGCCGGGCTGTACAGGTGCTTGAGGTATTCGATGGCAATCTCGGTATTGCCCTTCTTCTCGGCGTTCTTGT > 7:180984/1‑149 TCACGCGGGCGGTAGAAGTTCTCGGCGGCAATCTTCTGCCCGGCCGGGCTGTACAGGTGCTTGAGGTATTCGATGGCAATCTCGGTATTGCCCTTCTTCTCGGCGTTCTTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAA < 3:88249/149‑1 ACGCGGGCGGTAGAAGTTCTCGGCGGCAATCTTCTGCCCGGCCGGGCTGTACAGGTGCTTGAGGTATTCGATGGCAATCTCGGTATTGCCCTTCTTCTCGGCGTTCTTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAAG < 6:305252/148‑1 GCGGGCGGTAGAAGTTCTCGGCGGCAATCTTCTGCCCGGCCGGGCTGTACAGGTGCTTGAGGTATTCGATGGCAATCTCGGTATTGCCCTTCTTCTCGGCGTTCTTGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAAGAAC < 8:180984/149‑1 TGTCGATCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAAGAACGCCGAGAAGAAGGGCAATACCGAGATTGCCATCGAATACCTCAAGCACCTGTACAGCCCGGCCGGGCAGAAGATTGCCGCCGAGAACTTCTACCGCCCGCGTGAC > 8:73808/1‑149 CGGGAACTGCTTGCCGAACTGCGCAGCGACTTTCTCGTCACGCGGGCGGTAGAAGTTCTCGGCGGCAATCTTCTGCCCGGCCGGGCTGTACAGGTGCTTGAGGTATTCGATGGCAATCTCGGTATTGCCCTTCTTCTCGGCGTTCTTGTCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5896468‑5896619‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgtcgaTCCTGGCCGAGCCGCCAGTGGCCGTGGTCGACAAGAACGCCGAGAAGAAGGGCAATACCGAGATTGCCATCGAATACCTCAAGCACCTGTACAGCCCGGCCGGGCAGAAGATTGCCGCCGAGAACTTCTACCGCCCGCGTGAC < NC_002947/5896646‑5896504 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |