New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 250236	44 (0.870)	9 (0.190)	7/238	NT	18.4%	coding (967/1347 nt)	nfeD	membrane bound peptidase NefD
	?	NC_002947	= 250260	39 (0.840)					coding (943/1347 nt)	nfeD	membrane bound peptidase NefD

AGAGCCATGCCCAGCACGCCACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCCAGCAGCAGGCAGATACCACCGACCACACCGCCCACC  >  NC_002947/250091‑250384                                                                                                                                                  |                                                                                                                                                     agagCCATGCCCAGCACGCCACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGa                                                                                                                                                    <  8:193938/148‑1 (MQ=255)     ccATGCCCAGCACGCCACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCttcttgc                                                                                                                                               >  6:168586‑M1/1‑142 (MQ=255)       aTGCCCAGCACGCCACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGcc                                                                                                                                             >  1:151996/1‑149 (MQ=255)       aTGCCCAGCACGCCACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGcc                                                                                                                                             >  5:71647/1‑149 (MQ=255)       aTGCCCAGCACGCCACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGcc                                                                                                                                             >  5:264940/1‑149 (MQ=255)                aCGCCACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTggg                                                                                                                                    >  3:256141/1‑149 (MQ=255)                    cACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGc                                                                                                                                   >  8:159881/1‑146 (MQ=255)                    cACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCaag                                                                                                                                <  5:21383/149‑1 (MQ=255)                      ccGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCaagaa                                                                                                                              <  2:151996/149‑1 (MQ=255)                          tCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCttcttgcccagtttcggcgtggtcggct                                                                                                                          >  5:167942‑M1/1‑121 (MQ=255)                             ggAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcg                                                                                                                       >  7:240692‑M2/1‑142 (MQ=255)                              gAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcgg                                                                                                                      <  1:226678‑M2/149‑9 (MQ=255)                              gAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcgg                                                                                                                      >  2:179741‑M2/1‑141 (MQ=255)                               aGTGCCGAGAGCTGCGCGAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCATCGATGCCGCCGAAGCCttcttgcccagtttcggcgtggtcggcttcggc                                                                                                                     <  7:246542‑M1/149‑34 (MQ=255)                               aGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCttcttgcccagtttcggcgtggtcggcttcggc                                                                                                                     <  6:167942‑M1/149‑34 (MQ=255)                               aGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCttcttgcccagtttcggcgtggtcggcttcggc                                                                                                                     <  5:168586‑M1/149‑34 (MQ=255)                                   ccGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATc                                                                                                                 <  4:256141/149‑1 (MQ=255)                                   ccGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGCCAACGATGCCGCCCAAGCCGACAACGCCCAAAATGCGCAAGAAGGCTTCGGCGAt                                                                                                                  >  6:14092/1‑148 (MQ=255)                                      agagCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCAt                                                                                                               >  2:291404/1‑148 (MQ=255)                                       gagCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATg                                                                                                              >  8:16155/1‑148 (MQ=255)                                        agcagcGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGaa                                                                                                            <  7:159881/149‑1 (MQ=255)                                           agcGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCttcttgcccagtttcggcgtggtcggcttcggcg                                                                                                                    >  6:102483‑M1/1‑104 (MQ=255)                                           agcGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCttcttgcccagtttcggcgtggtcggcttcggcg                                                                                                                    <  5:102483‑M1/138‑35 (MQ=255)                                             cgcCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGa                                                                                                       <  6:71647/149‑1 (MQ=255)                                                  aGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGcc                                                                                                   >  1:57047/1‑148 (MQ=255)                                                        cGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAg                                                                                             >  8:206732/1‑148 (MQ=255)                                                             aaGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAg                                                                                       >  2:68598/1‑149 (MQ=255)                                                                gCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAgcgc                                                                                    <  7:64339/149‑1 (MQ=255)                                                                gCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAgcgc                                                                                    <  1:68598/149‑1 (MQ=255)                                                                        gATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCgg                                                                            <  2:226678/149‑1 (MQ=255)                                                                             cGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCaaaa                                                                       >  8:271854/1‑149 (MQ=255)                                                                             cGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGCCTTCGGCGATCATGAACGTGATGCCAAGAAGGATCAGCTCCACCCCCGCaaa                                                                        >  2:286403/1‑148 (MQ=255)                                                                              gAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCttcttgcccagtttcggcgtggtcggcttcgg                                                                                                                      <  1:263285‑M1/101‑33 (MQ=255)                                                                              gAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCttcttgcccagtttcggcgtggtcggcttcgg                                                                                                                      >  2:263285‑M1/1‑69 (MQ=255)                                                                                         cGTCGGTGTCGATCAGGATCAATGCGCCGACCTCATAGGCAACGATGCCTGCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGGTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAAc                                                           <  1:286403/149‑1 (MQ=255)                                                                                            cGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAg                                                         >  5:140449/1‑148 (MQ=255)                                                                                            cGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAg                                                         <  6:140449/148‑1 (MQ=255)                                                                                                    aTCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTggg                                                                                                                                    <  4:199751/65‑1 (MQ=255)                                                                                                    aTCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTggg                                                                                                                                    >  3:199751/1‑65 (MQ=255)                                                                                                         gATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCa                                               >  7:136626/1‑145 (MQ=255)                                                                                                         gATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCa                                               <  8:136626/145‑1 (MQ=255)                                                                                                         gATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATa                                             >  1:20660/1‑147 (MQ=255)                                                                                                                 cgcCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCcag                                    >  3:89613/1‑148 (MQ=255)                                                                                                                 cgcCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCcag                                    <  7:206732/148‑1 (MQ=255)                                                                                                                  gcCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCcag                                    >  6:110522/1‑147 (MQ=255)                                                                                                                   ccGACCACAAAGGCAACGATGCCGCCGAAGCCGACAACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCAACCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCcagcag                                 >  3:172159/1‑149 (MQ=255)                                                                                                                        cacaAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCCAGCAgcagg                             >  2:32089/1‑148 (MQ=255)                                                                                                                          caAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCAc                                                                  <  5:230060/109‑1 (MQ=255)                                                                                                                          caAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCAc                                                                  >  6:230060/1‑109 (MQ=255)                                                                                                                           aaaGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCa                                                             <  8:234192/113‑1 (MQ=255)                                                                                                                           aaaGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCa                                                             >  7:234192/1‑113 (MQ=255)                                                                                                                                cAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCCAGCAGCAGGCAGATacca                    <  8:62942/149‑1 (MQ=255)                                                                                                                                cAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCCAGCAGCAGGCAGATacca                    <  1:32089/149‑1 (MQ=255)                                                                                                                                  aCGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCCAGCAGCCGGCAGATaccacc                  >  5:242294/1‑149 (MQ=255)                                                                                                                                   cGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCCAGCAGCAGGCAGATACCACCg                 <  7:115205/149‑1 (MQ=255)                                                                                                                                         cgccgAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttggcgct                      <  5:102483‑M2/138‑105 (MQ=255)                                                                                                                                         cgccgAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttggcgct                      >  6:102483‑M2/1‑34 (MQ=255)                                                                                                                                         cgccgAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCcagcagc                                <  6:236732/128‑1 (MQ=255)                                                                                                                                         cgccgAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCcagcagc                                >  5:236732/1‑128 (MQ=255)                                                                                                                                          gccgAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttggcgctgctctcggcact          <  5:168586‑M2/149‑117 (MQ=255)                                                                                                                                          gccgAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttggcgctgctctcggcact          <  6:167942‑M2/149‑117 (MQ=255)                                                                                                                                          gccgAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcggcggcatcgatgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttcgcgcagctctcggcact          <  7:246542‑M2/149‑117 (MQ=255)                                                                                                                                           ccgAAGCCttcttgcccagtttcggcgtggtcggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttggcgctgctctcggcactc         >  2:179741‑M1/1‑8 (MQ=255)                                                                                                                                           ccgAAGCCttcttgcccagtttcggcgtggtcggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttggcgctgctctcggcactc         <  1:226678‑M1/149‑142 (MQ=255)                                                                                                                                           ccgAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttc                                                         >  2:263285‑M2/1‑32 (MQ=255)                                                                                                                                           ccgAAGCCGACCACGCCGAAACTGGGCAAGAAggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttc                                                         <  1:263285‑M2/101‑70 (MQ=255)                                                                                                                                            cgAAGCCttcttgcccagtttcggcgtggtcggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttggcgctgctctcggcactcc        >  7:240692‑M1/1‑7 (MQ=255)                                                                                                                                               aGCCGACCACGCCGAAACTGGGCAAGAAggcttcggcggcatcgttgcctttgtggtcggcgcattgatcctgatcgacaccgacgctcccggtttcggcatccccctggccttgatcggcaccttggcgctgctctcggcactcctga     >  5:167942‑M2/1‑28 (MQ=255)                                                                                                                                                  cGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCCAGCAGCAGGCAGATACCACCGAACACAGCGCCCAcc  <  2:57047/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                     AGAGCCATGCCCAGCACGCCACCGATCAGGAGTGCCGAGAGCAGCGCCAAGGTGCCGATCAAGGCCAGGGGGATGCCGAAACCGGGAGCGTCGGTGTCGATCAGGATCAATGCGCCGACCACAAAGGCAACGATGCCGCCGAAGCCGACCACGCCGAAACTGGGCAAGAAGGCTTCGGCGATCATGAAGGTGATGCCAAGCAGGATCAGCGCCACCCCGGCAAAACTCACCGGCAACAGCTGCAGCGCATACAGCGCCAGCAGCAGGCAGATACCACCGACCACACCGCCCACC  >  NC_002947/250091‑250384

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.