New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 251034	53 (1.050)	3 (0.060)	3/248	NT	5.6%	coding (169/1347 nt)	nfeD	membrane bound peptidase NefD
	?	NC_002947	= 251061	51 (1.050)					coding (142/1347 nt)	nfeD	membrane bound peptidase NefD

TGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCC  >  NC_002947/250893‑251180                                                                                                                                              |                                                                                                                                                       tGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑gc                                                                                                                                               <  7:244443/149‑1 (MQ=255) tGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑gc                                                                                                                                               <  5:134892/149‑1 (MQ=255) tGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑gc                                                                                                                                               >  2:287258/1‑149 (MQ=255)      gcgcTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GTCTT‑GCgcctg                                                                                                                                          <  7:253015/149‑1 (MQ=255)      gcgcTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCgcctg                                                                                                                                          >  6:147414/1‑149 (MQ=255)           agcggcgCCCGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCgcctgggcct                                                                                                                                     >  1:98054/2‑149 (MQ=255)             cggcgCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATTGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCgcctgggcctgg                                                                                                                                   <  8:66923/149‑1 (MQ=255)             cggcgCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCgcctgggcctgg                                                                                                                                   <  8:119727/149‑1 (MQ=255)               gcgcGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGc‑c                                                                                                                                <  5:147414/149‑1 (MQ=255)                 gcccgcgcCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGa                                                                                                                              <  2:98054/145‑1 (MQ=255)                   gggCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAg‑g                                                                                                                           >  6:149913/1‑149 (MQ=255)                         cgcTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTgcg                                                                                                                      <  3:229591‑M2/148‑4 (MQ=255)                           cTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCAc                                                                                                                   >  6:20773/1‑149 (MQ=255)                              ggggCAACGTAGCTGGCGACGGGTAAGGTGCTTGAGACAATTCCCTTGATCATCTCGCGCATGCCACTGGCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCagcctcggccaggcccaggcgcaaggcgcgcaac                                                                                                                      <  3:177825‑M1/147‑35 (MQ=255)                                 gCAACGTAGCTGGCGACGTGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCATCCCGCGCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTa                                                                                                             <  6:194126/149‑1 (MQ=255)                                       tAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGgc                                                                                                       <  8:253745/149‑1 (MQ=255)                                       tAGCAGGCGACGGGTTCGGTGCGGGAGCGCATGCCCTTGATCATCTGGCGCTTGTCACTGTCCAGCCCGCCCGGGGTATCCATCCGGATAACCACCAGTTGCGC‑GCCGT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGgc                                                                                                       <  8:253561/149‑1 (MQ=255)                                            ggCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCAGCCTC‑G‑GCCAGGCCCAGGCGCAAG‑GCcgcaactggtggttatccgc                                                                                                      <  7:301900‑M2/147‑21 (MQ=255)                                            ggCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGCAGCCTC‑G‑GCCAGGCCCAGGCGCAAG‑GCcgcaactggtggttatccgc                                                                                                      >  8:301900‑M2/1‑127 (MQ=255)                                                     tACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGa                                                                                         <  1:248764/149‑1 (MQ=255)                                                       cGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGAt                                                                                        <  4:313511/148‑1 (MQ=255)                                                       cGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATg                                                                                       <  5:20773/149‑1 (MQ=255)                                                                     aTTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGtt                                                                         <  4:229591/149‑1 (MQ=255)                                                                      ttGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTc                                                                        <  5:242038/149‑1 (MQ=255)                                                                          cTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAGCGCTGCGCACCAGGTAGTCGGCGCTgg                                                                                                  <  1:4591/120‑1 (MQ=255)                                                                          cTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTgg                                                                                                  >  2:4591/1‑119 (MQ=255)                                                                          cTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGACCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCa                                                                    >  7:270746/1‑149 (MQ=255)                                                                              atcatcTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCca                                                                <  5:149913/149‑1 (MQ=255)                                                                               tcatcTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCcac                                                               >  1:283838/1‑149 (MQ=255)                                                                                 atcTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCcaca                                                              <  1:287258/148‑1 (MQ=255)                                                                                  tcTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACGcc                                                            >  4:9675/1‑149 (MQ=255)                                                                                      gcgcATTGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTTAGCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTg                                                                                                   <  1:67560/107‑1 (MQ=255)                                                                                      gcgcATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTg                                                                                                   >  2:67560/1‑106 (MQ=255)                                                                                        gcATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTTGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCg                                                      <  6:314744/149‑1 (MQ=255)                                                                                           tGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGgc                                                   >  5:147547/1‑149 (MQ=255)                                                                                             gCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGACCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGgcg                                                  <  8:270746/148‑1 (MQ=255)                                                                                                 tGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGcc                                             >  5:265129/1‑149 (MQ=255)                                                                                                   tCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCt                                            <  2:283838/148‑1 (MQ=255)                                                                                                        cccgcccgGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCAc                                      >  1:155432/1‑149 (MQ=255)                                                                                                                 ggTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACGCCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGa                             <  3:9675/149‑1 (MQ=255)                                                                                                                     tCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGcc                         <  2:155432/149‑1 (MQ=255)                                                                                                                     tCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGc                          >  3:194389/1‑148 (MQ=255)                                                                                                                          gCGGATAACCACCAGTTGCGCgccttgcgcctgggcctggccgaggctgcgcaactggtggttatccgcatggataccccgggcgggctggacagtgccatgcgccagatgatcaaggcaattctctccagcaccgtacccgtcgcc                          <  7:301900‑M1/147‑127 (MQ=255)                                                                                                                          gCGGATAACCACCAGTTGCGCgccttgcgcctgggcctggccgaggctgcgcaactggtggttatccgcatggataccccgggcgggctggacagtgccatgcgccagatgatcaaggcaattctctccagcaccgtacccgtcgcc                          >  8:301900‑M1/1‑21 (MQ=255)                                                                                                                          gCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCg                                                                                                         >  1:312394/1‑64 (MQ=255)                                                                                                                          gCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCg                                                                                                         <  2:312394/64‑1 (MQ=255)                                                                                                                              aTAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGcaacaa                >  6:308483/1‑149 (MQ=255)                                                                                                                                aaCCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGcaacaa                >  7:240318/1‑147 (MQ=255)                                                                                                                                aaCCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGcaacaa                >  1:219297/1‑147 (MQ=255)                                                                                                                                 accaccAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAacaaca              <  6:265129/148‑1 (MQ=255)                                                                                                                                 accaccAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAAcag             >  4:108082/1‑149 (MQ=255)                                                                                                                                  ccaccaGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCAc                                                                   <  6:215952/94‑1 (MQ=255)                                                                                                                                  ccaccaGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCAc                                                                   >  5:215952/1‑94 (MQ=255)                                                                                                                                  ccaccaGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAAcagc            <  4:194389/149‑1 (MQ=255)                                                                                                                                   caccaGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCa                                                                       <  1:247114/89‑1 (MQ=255)                                                                                                                                   caccaGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCa                                                                       >  2:247114/1‑89 (MQ=255)                                                                                                                                   caccaGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTgg                                  <  4:243972/126‑1 (MQ=255)                                                                                                                                   caccaGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTgg                                  >  3:243972/1‑126 (MQ=255)                                                                                                                                     ccaGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAAccgcag          >  6:276954/1‑148 (MQ=255)                                                                                                                                        gTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTgcgcaactggtggttatccgcatggataccccgggcgggctggccagtggcatgcgcgagatgatcaagggaattgtctcaagcaccttacccgtcgccagctacgttgcccc        <  3:177825‑M2/147‑114 (MQ=255)                                                                                                                                           gcgc‑gcCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCaacaac               >  7:243164/1‑137 (MQ=255)                                                                                                                                           gcgc‑gcCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCaacaac               <  8:243164/137‑1 (MQ=255)                                                                                                                                            cgcagcctcggccaggcccaggcgcaaggcgcgcaactggtggttatccgcatggataccccgggcgggctggacagtgccatgcgccagatgatcaaggcaattctctccagcaccgtacccgtcgccagctacgttgcccccagcg       <  3:229591‑M1/148‑146 (MQ=255)                                                                                                                                            cgc‑gcCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGcc  <  6:147547/149‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                       TGCCGGCGCTGGCGGCGCGGGCGCCGCTGGGGGCAACGTAGCTGGCGACGGGTACGGTGCTGGAGAGAATTGCCTTGATCATCTGGCGCATGGCACTGTCCAGCCCGCCCGGGGTATCCATGCGGATAACCACCAGTTGCGC‑GCCTT‑GCGCCTGGGCCTGGC‑CGAG‑GCTGCGCACCAGGTAGTCGGCGCTGGCCGGGCCGATGGCGTCGTCGATGTTCAGCACCCACACCGCGCCGGGCGCTGCCTGGCCACCTGGCGTGATGCCAAGCAACAACAGCAGCAACAGCC  >  NC_002947/250893‑251180

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.