| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 448492 = | 47 (0.930) | 6 (0.120) | 6/256 | NT | 12.0% | coding (1071/1284 nt) | PP_0369 | diguanylate cyclase |
| ? | NC_002947 | 448533 = | 41 (0.820) | coding (1112/1284 nt) | PP_0369 | diguanylate cyclase | |||||
CGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCTTTACAGTGCCAAAGGCG > NC_002947/448352‑448640 | cGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCgg < 2:97103/149‑1 (MQ=255) ttATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑gc < 2:214126/149‑1 (MQ=255) ggCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑gc‑gc > 7:185056/1‑147 (MQ=255) ggaggaGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGcc > 4:121636/1‑149 (MQ=255) aggagTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCgg < 1:209199/149‑1 (MQ=255) agTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCt < 3:243195/149‑1 (MQ=255) gTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTg > 2:62959/1‑149 (MQ=255) ttCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTgg < 8:244777/149‑1 (MQ=255) acaattgcgccccgcgcctttggcactgtaaagcgcctggtcggcggatttcagcaccgcctcggggttgcgatgatcggcctggcgctcggccacgccgatactgatggtgaccgagaccgTAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTgg < 5:96009‑M1/27‑1 (MQ=255) cGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGc < 3:121636/148‑1 (MQ=255) ttgcgccccgcgcctttggcactgtaaagcgcctggtcggcggatttcagcaccgcctcggggttgcgatgatcggcctggcgctcggccacgccgatactgatggtgaccgagaccgTGC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAgc < 3:193474‑M1/31‑1 (MQ=255) gccccgcgcctttggcactgtaaagcgcctggtcggcggatttcagcaccgcctcggggttgcgatgatcggcctggcgctcggccacgccgatactgatggtgaccgagaccgTGC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCcg > 4:193474‑M1/115‑149 (MQ=255) gtgtTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCcgg > 8:13462/1‑149 (MQ=255) gtTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAc‑cgcc > 2:54513/1‑118 (MQ=255) gtTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAc‑cgcc < 1:54513/118‑1 (MQ=255) ttCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCcggcgg > 8:19020/1‑149 (MQ=255) ttCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCcggcgg < 1:108497/149‑1 (MQ=255) ccGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACg > 5:119402/1‑149 (MQ=255) aaGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAgc > 7:142885/1‑132 (MQ=255) aaGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAgc < 8:142885/132‑1 (MQ=255) aaGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGtctc > 5:250090/1‑149 (MQ=255) aGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCg < 2:226095/149‑1 (MQ=255) cgccgcGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCa > 5:235096/1‑149 (MQ=255) cGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATc < 1:62959/148‑1 (MQ=255) gTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGtctc > 6:205601/1‑131 (MQ=255) gTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGtctc < 5:205601/131‑1 (MQ=255) tGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGc < 7:19020/149‑1 (MQ=255) gCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCg > 4:52679/1‑149 (MQ=255) ccGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGCCTGGCAGCGCCCGCGGCACGGTCTCCGTCACCATCAGTAACGGCGt > 7:300645/1‑149 (MQ=255) aTGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCAGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGcc < 6:235096/149‑1 (MQ=255) gAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAgcg > 7:107947/1‑149 (MQ=255) gAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAgcg > 3:78961/1‑149 (MQ=255) aaGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAgcgc < 3:52679/149‑1 (MQ=255) gtgAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGat < 3:299896/149‑1 (MQ=255) aGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGatcatc < 8:185056/149‑1 (MQ=255) cGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGt > 8:137004/1‑102 (MQ=255) cGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGt < 7:137004/102‑1 (MQ=255) aTTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAg < 6:119402/149‑1 (MQ=255) ttACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCcggcg < 7:5254/83‑1 (MQ=255) ttACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCcggcg > 8:5254/1‑83 (MQ=255) gTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGCGGCGGt > 5:199367/1‑149 (MQ=255) tGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATcc > 1:300703/1‑149 (MQ=255) cgcgATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATccgc > 8:161731/1‑149 (MQ=255) cAGCACAACCGCCCGCAGGACGATACGCGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGAc > 1:2981/1‑148 (MQ=255) gCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCCGGGCTGTAATCCGCCGGCCAgg > 8:225367/1‑149 (MQ=255) tgatggtgaccgagaccgTGC‑CGCCGGCGCTGCCAGCCCGGCGCTGGC‑GC‑CCGGCGGTACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGgcgc < 6:96009‑M1/131‑1 (MQ=255) aaCCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCt > 4:277963/1‑149 (MQ=255) cgcAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCTTTa > 4:252656/1‑145 (MQ=255) cgcAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCTTTa < 3:252656/145‑1 (MQ=255) gcAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAgcgc > 5:232223/1‑88 (MQ=255) gcAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAgcgc < 6:232223/88‑1 (MQ=255) cgagaccgTGC‑CGCCGGCGCTGCCAGCCCGGCGCTGGC‑GC‑CCGGCGGTACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCTTTAc > 4:71038‑M1/9‑144 (MQ=255) cgagaccgTGC‑CGCCGGCGCTGCCAGCCCGGCGCTGGC‑GC‑CCGGCGGTACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCTTTAc < 3:71038‑M1/136‑1 (MQ=255) gACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCGGCGCCGGCGGCACGGTCTCGGTCACCATAAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCCCGGCGGTGCTGAAATACGCCGCCCAGGCGCGTTACAGTGCCa > 8:198637/1‑148 (MQ=255) gACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGatcatc > 5:214270/1‑97 (MQ=255) gACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGatcatc < 6:214270/97‑1 (MQ=255) TAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCTTTACAGTGCCAAGGgcg > 7:161731‑M1/1‑149 (MQ=255) TAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCTTTACAGTGCCAAAGgcg < 5:98795‑M1/149‑1 (MQ=255) | CGTTATGGCGGGGAGGAGTTCGCCCTGGTGTTCGCCGGCAAGACCGCCGCGGAATGCGTGCCGCATGTGGAAGCCGTGCGTGAAGTGATCGCCAATTACGTGATGCACCTGCGCGATCAGCACAACCGCCCGCAGGACGATAC‑CGCCGG‑GC‑GCCAGCGCCGGGCTGGCAGCGCCGGCGGCACGGTCTCGGTCACCATCAGTATCGGCGTGGCCGAGCGCCAGGCCGATCATCGCAACCCCGAGGCGGTGCTGAAATCCGCCGACCAGGCGCTTTACAGTGCCAAAGGCG > NC_002947/448352‑448640 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |