New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1400633	44 (0.870)	4 (0.080)	4/244	NT	8.1%	coding (603/807 nt)	ybgF	TolQRA transport system periplasmic protein
	?	NC_002947	= 1400657	49 (1.030)					coding (627/807 nt)	ybgF	TolQRA transport system periplasmic protein

CGACGCAGCTTTCGACCTGATCAAACAGAAAGACTTCGACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGAC  >  NC_002947/1400486‑1400779                                                                                                                                                    |                                                                                                                                                    cgacgCAGCTTTCGACCTGATCAAACAGAAAGACTTCGACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGc                                                                                                                                                    <  2:10998/149‑1 (MQ=255)        gCTTTCGACCTGATCAAACAGAAAGACTTCGACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGgcgc                                                                                                                                             <  8:24747/149‑1 (MQ=255)                  tGATCAAACAGAAAGACTTCGACATGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTTCTTGGGTGAAGTGAACCTGGCCAAGCGTGACCTGCAAGCCGCCAG‑CCAGGcc                                                                                                                                  >  7:173888/1‑149 (MQ=255)                        aaCAGAAAGACTTCGACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGggcaaaggcctggctggcgccttg                                                                                                                             >  7:161899‑M1/1‑125 (MQ=255)                        aaCAGAAAGACTTCGACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCgcca                                                                                                                                           <  1:197528/135‑1 (MQ=255)                        aaCAGAAAGACTTCGACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCgcca                                                                                                                                           >  2:197528/1‑135 (MQ=255)                               aGACTTCGACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCcaggtca                                                                                                                     <  8:163916‑M2/149‑8 (MQ=255)                                      gACAAGTCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGggcaaaggcctggctggcgccttgcaggtcacccttg                                                                                                                <  8:161899‑M1/148‑38 (MQ=255)                                      gACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCaaaa                                                                                                              <  5:103042/149‑1 (MQ=255)                                       aCAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAg                                                                                                             >  1:175281/1‑149 (MQ=255)                                        cAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGggcaaaggcctggctggcgccttgcaggtcacc                                                                                                                    <  4:129611‑M1/142‑34 (MQ=255)                                        cAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGggcaaaggcctggctggcgccttgcaggtcacc                                                                                                                    >  3:129611‑M1/1‑109 (MQ=255)                                        cAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAg                                                                                                             >  7:52970/1‑148 (MQ=255)                                            gccagccaGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCc                                                                                                                           <  8:246‑M2/130‑2 (MQ=255)                                            gccagccaGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCc                                                                                                                           >  7:246‑M2/1‑129 (MQ=255)                                            gccagccaGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTAccc                                                                                                        <  4:204302/149‑1 (MQ=255)                                              cagccagGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGcc                                                                                                                            <  8:179722/127‑1 (MQ=255)                                              cagccagGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGcc                                                                                                                            >  7:179722/1‑127 (MQ=255)                                               agccagGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACACCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCg                                                                                                       >  1:75848/1‑147 (MQ=255)                                                     gCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAg                                                                                               >  1:18320/1‑149 (MQ=255)                                                     gCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAg                                                                                               <  1:133270/149‑1 (MQ=255)                                                      cGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGc                                                                                              <  2:175281/149‑1 (MQ=255)                                                            aCGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTg                                                                                        >  6:300489/1‑149 (MQ=255)                                                                cTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGa                                                                                                      <  2:173105/131‑1 (MQ=255)                                                                cTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGa                                                                                                      >  1:173105/1‑131 (MQ=255)                                                                 ttCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTAGGGTGAAGTCAACCTGGCAAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTATGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTCCCCGa                                                                                   >  7:91253/1‑149 (MQ=255)                                                                       cgcAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCt                                                                             <  2:199228/149‑1 (MQ=255)                                                                         cAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGt                                                                           <  5:300489/149‑1 (MQ=255)                                                                              aCCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACaaa                                                                      >  1:164722/1‑149 (MQ=255)                                                                                 ccAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAT‑CCAGGCCTTTGCACAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTAAAAACTg                                                                   >  8:133761/1‑149 (MQ=255)                                                                                  cAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGCCGCCAG‑CCAGGCCTTTCCCCAGGTCACCAAAAAGTACCCGAAGCAAAGCAAGGTGCCAGCTTCGCTGTACAAACtcg                                                                  >  6:7952/1‑147 (MQ=255)                                                                                   aaCAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCc                                                                                                                           <  5:49187‑M2/91‑2 (MQ=255)                                                                                   aaCAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCc                                                                                                                           >  6:49187‑M2/1‑90 (MQ=255)                                                                                       gCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGAt                                                             <  7:163916/149‑1 (MQ=255)                                                                                                ccGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAgcgc                                                    >  3:135232/1‑149 (MQ=255)                                                                                                   gttaTGCCCAATAGTGGTTGGGTGAAGTGAACCTGGCCAAGGGGGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGt                                                 <  8:173888/146‑1 (MQ=255)                                                                                                    tAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAgcgc                                                    <  4:251605/145‑1 (MQ=255)                                                                                                    tAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAgcgc                                                    >  3:251605/1‑145 (MQ=255)                                                                                                       tGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATgg                                             <  8:52970/149‑1 (MQ=255)                                                                                                          ccAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGc                                           >  1:105155/1‑148 (MQ=255)                                                                                                                   gTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAGACCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAACCACAGCAAGGTGCCAGATTCGCTGTACAAACTgg                                                                  >  1:229561/1‑117 (MQ=255)                                                                                                                   gTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTgg                                                                  <  2:229561/116‑1 (MQ=255)                                                                                                                      gggTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAg                               <  7:133761/148‑1 (MQ=255)                                                                                                                           aagtgaaCCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTaaaa                         <  2:164722/149‑1 (MQ=255)                                                                                                                              tgaaCCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCt                                                                >  8:24419/1‑107 (MQ=255)                                                                                                                              tgaaCCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCt                                                                <  7:24419/107‑1 (MQ=255)                                                                                                                                 aCCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATc                   <  4:135232/149‑1 (MQ=255)                                                                                                                                   cTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCt                 <  2:75848/149‑1 (MQ=255)                                                                                                                                   cTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCt                 >  8:126589/1‑149 (MQ=255)                                                                                                                                       ccAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAg                               <  3:104899/131‑1 (MQ=255)                                                                                                                                       ccAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAg                               >  4:104899/1‑131 (MQ=255)                                                                                                                                       ccAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTcag             >  8:21492/1‑149 (MQ=255)                                                                                                                                        cAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCcaggtcacccttggccaggttcacttcacccaaccagtattgggcattaccggcgtactggctgttggggtacttgcgcaggaaggcgttgaacgcctggctggacttgtc             <  8:161899‑M2/148‑112 (MQ=255)                                                                                                                                        cAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATAc                                      <  3:93004/123‑1 (MQ=255)                                                                                                                                        cAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATAc                                      >  4:93004/1‑123 (MQ=255)                                                                                                                                            ggTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCcaggtcacccttggccaggttcacttcacccaaccagtattgggcattaccggcgtactggctgttggggtacttgcgcaggaaggcgttgaacgcctggctggccttg               >  3:129611‑M2/1‑33 (MQ=255)                                                                                                                                            ggTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCcaggtcacccttggccaggttcacttcacccaaccagtattgggcattaccggcgtactggctgttggggtacttgcgcaggaaggcgttgaacgcctggctggccttg               <  4:129611‑M2/142‑110 (MQ=255)                                                                                                                                              tGACCTGggcaaaggcctggctggcgccttgcaggtcacccttggccaggttcacttcacccaaccagtattgggcattaccggcgtactggctgttggggtacttgcgcaggaaggcgttgaacgcctggctggccttgtcgaagtct       <  8:163916‑M1/149‑143 (MQ=255)                                                                                                                                                 ccTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGa   <  2:105155/149‑1 (MQ=255)                                                                                                                                                  cTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGAc  >  7:59651/1‑149 (MQ=255)                                                                                                                                                    gggcaaaggcctggctggcgccttgcaggtcacccttggccaggttcacttcacccaaccagtattgggcattaccggcgtactggctgttggggtacttgcgcaggaaggcgttgaacgcctggctggc                    <  8:246‑M1/130‑130 (MQ=255)                                                                                                                                                    gggcaaaggcctggctggcgccttgcaggtcacccttggccaggttcacttcacccaaccagtattgggcattaccggcgtactggctgttggggtacttgcgcaggaaggcgttgaacgcctggctggc                    >  7:246‑M1/1‑1 (MQ=255)                                                                                                                                                    gggcaaaggcctggctggcgccttgcaggtcacccttggccaggttcacttcacccaaccagtattgggcattaccggcgtactggctgtt                                                           >  6:49187‑M1/1‑1 (MQ=255)                                                                                                                                                    gggcaaaggcctggctggcgccttgcaggtcacccttggccaggttcacttcacccaaccagtattgggcattaccggcgtactggctgtt                                                           <  5:49187‑M1/91‑91 (MQ=255)                                                                                                                                                    |                                                                                                                                                    CGACGCAGCTTTCGACCTGATCAAACAGAAAGACTTCGACAAGGCCAGCCAGGCGTTCAACGCCTTCCTGCGCAAGTACCCCAACAGCCAGTACGCCGGTAATGCCCAATACTGGTTGGGTGAAGTGAACCTGGCCAAGGGTGACCTGCAAGGCGCCAG‑CCAGGCCTTTGCCCAGGTCAGCCAAAAGTACCCGAAGCACAGCAAGGTGCCAGATTCGCTGTACAAACTGGCTGATGTCGAGCGCCGTATGGGCCATACCGACAAGGTAAAAGGCATCCTTCAGCAGGTCGTGAC  >  NC_002947/1400486‑1400779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.