New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1907210 =	42 (0.830)	3 (0.060)	3/248	NT	6.7%	coding (529/951 nt)	PP_1707	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein
	?	NC_002947	1907243 =	43 (0.890)					coding (496/951 nt)	PP_1707	D‑isomer specific 2‑hydroxyacid dehydrogenase family protein

ACGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGC  >  NC_002947/1907069‑1907353                                                                                                                                              |                                                                                                                                                 aCGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATc                                                                                                                                           <  3:259942/149‑1 (MQ=255)   gCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCgg                                                                                                                                         <  6:200352/149‑1 (MQ=255)     cTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCggg                                                                                                                                        <  4:161245/148‑1 (MQ=255)     cTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCggg                                                                                                                                        >  3:161245/1‑148 (MQ=255)             cGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAg                                                                                                                              <  5:56321/149‑1 (MQ=255)                   gATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTgcc                                                                                                                        >  1:215854/1‑149 (MQ=255)                       gATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTgccgcc                                                                                                                     <  4:191963/148‑1 (MQ=255)                        aTCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGccgcccg                                                                                                                   >  5:108539/1‑149 (MQ=255)                        aTCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGccgccc                                                                                                                    <  6:183637/148‑1 (MQ=255)                         tCAGCGCCTCGCCCTTGTCAGCCGCCGCTGGGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAgg                                                                                                                             <  5:280046/138‑1 (MQ=255)                         tCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAgg                                                                                                                             >  6:280046/1‑138 (MQ=255)                            gcgcCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCTCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTACGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCtgt                                                                                                               <  6:25062/149‑1 (MQ=255)                            ccggccgttgggccaccagcaccacgccgctggcaccgctgccactggcccggcaggtgtcgggcatgcgcgtgggcatcgtcggcatgggccgggtcgggcgggcggtagcacAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCtgt                                                                                                               >  5:248858‑M1/115‑149 (MQ=255)                                 tCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTAc                                                                                                          >  2:228290/1‑149 (MQ=255)                                           cAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCt                                                                                                                           >  2:17950/1‑122 (MQ=255)                                           cAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCt                                                                                                                           <  1:17950/122‑1 (MQ=255)                                                 ccgcTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCgg                                                                                          <  2:215854/149‑1 (MQ=255)                                                   acgccgctggcaccgctgccactggcccggcaggtgtcgggcatgcgcgtgggcatcgtcggcatgggccgggtcgggcgggcggtagcacAGCGGATCGGGCAAC‑CGAAGGCTGccgcccg                                                                                                                   <  2:124473‑M1/31‑1 (MQ=255)                                                   acgccgctggcaccgctgccactggcccggcaggtgtcgggcatgcgcgtgggcatcgtcggcatgggccgggtcgggcgggcggtagcacAGCGGATCGGGCAAC‑CGAAGGCTGccgcccg                                                                                                                   >  1:124473‑M1/92‑122 (MQ=255)                                                           gATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCcga                                                                                >  4:151859/1‑149 (MQ=255)                                                                     tCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCCCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCAc                                                                      <  1:228290/149‑1 (MQ=255)                                                                      cGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGAcc                                                                                             <  3:199794/125‑1 (MQ=255)                                                                      cGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGAcc                                                                                             >  4:199794/1‑125 (MQ=255)                                                                      cGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCAcg                                                                     >  7:162039/1‑149 (MQ=255)                                                                                ggCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGAGCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGcc                                                             <  7:210245/147‑1 (MQ=255)                                                                                          agcagATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCg                                                 >  4:313846/1‑149 (MQ=255)                                                                                            cagATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCggg                                               >  4:185014/1‑149 (MQ=255)                                                                                                 cTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGt                                          >  8:11610/1‑149 (MQ=255)                                                                                                  tGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTg                                         >  8:243549/1‑149 (MQ=255)                                                                                                  tGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTg                                         >  3:209129/1‑149 (MQ=255)                                                                                                    ccTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGt                                          <  8:162039/146‑1 (MQ=255)                                                                                                         aaCCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAACTGGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCg                                   >  1:84621/1‑149 (MQ=255)                                                                                                            ccGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGc                               >  5:158184/1‑149 (MQ=255)                                                                                                              gTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGt                                          >  1:93745/1‑136 (MQ=255)                                                                                                              gTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGt                                          <  2:93745/136‑1 (MQ=255)                                                                                                                  ggCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAgcgg                         >  4:211278/1‑149 (MQ=255)                                                                                                                      caTCCAGTGCCTGTAGATCGGTGAAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgtg                     <  5:79448/149‑1 (MQ=255)                                                                                                                       aTCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgtgg                    >  6:4647/1‑149 (MQ=255)                                                                                                                               ccTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCtggt             <  5:4647/148‑1 (MQ=255)                                                                                                                               ccTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCCGCCCATGCCGACGATGCCCCCGCGCATGCCCGCCCCCAGCCGGGCCCGTGGCAGCGGTGCCCGCGGGGTGGTGCtggtg            >  1:292495/1‑149 (MQ=255)                                                                                                                                cTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCtggtgg           <  3:185014/149‑1 (MQ=255)                                                                                                                                   tAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGcc         >  2:274291/1‑148 (MQ=255)                                                                                                                                      aTCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAAc     >  5:57945/1‑149 (MQ=255)                                                                                                                                        cGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCa                                      >  6:238099/1‑114 (MQ=255)                                                                                                                                        cGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCa                                      <  5:238099/114‑1 (MQ=255)                                                                                                                                         ggTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACCCCAGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAAcggc  >  2:279537/1‑149 (MQ=255)                                                                                                                                           tgtAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgtg                     >  6:105497/1‑128 (MQ=255)                                                                                                                                           tgtAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCgtg                     <  5:105497/128‑1 (MQ=255)                                                                                                                                              |                                                                                                                                                 ACGCCTGAAGCACGTCGCGATTGATCAGCGCCTCGCCCTTGTCAGCCGCCGCTGCGAGGATCAGCGCATCGCTGTCCTTGGCCAACTGCAGCAGATCTGCCTCGAACCCGTAGGGCACATCCAGTGCCTGTAGATCGGTGTAGCGGATCGGGCAAC‑CGAAGGCTGCCGCCCGCTGTGCTACCGCCCGCCCGACCCGGCCCATGCCGACGATGCCCACGCGCATGCCCGACACCTGCCGGGCCAGTGGCAGCGGTGCCAGCGGCGTGGTGCTGGTGGCCCAACGGC  >  NC_002947/1907069‑1907353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.